Gene Mvan_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1872 
Symbol 
ID4647887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1997093 
End bp1998664 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content68% 
IMG OID639805360 
ProductNADH dehydrogenase subunit N 
Protein accessionYP_952699 
Protein GI120402870 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC CGACTCCCAC CGTCGAGTAC GGCCTGATCT CTCCGATGCT CATCGTGCTC 
GCCGCCGCCG TCCTCGGTGT GCTCGTGGAG GCGTTCGTGC CCCGCGGTCG GCGCTACGCC
GTGCAGGTGA CGCTCAGCAT TGCGGCGCTG GTGGCGTCGT TCGTCGCTGT GGTTCTGGTC
GCGCGGGACC TGCACGGCGG CAGCGGTTCC GAAGCCGTGA TGGGCGCGAT CGCCGTCGAC
ATGCCCGCGT TGTTCCTGCA GGGCACCATC CTCGTTGTCG GCGTGCTGGG CATCCTGCTG
ATCGGTGAGC GGCAGATCTC CGCGCCGGGG CCCGACACCG AAGGCAGAGG GTTGGAGGCG
TTCACCCCGC AGGCGTCCGC GGTCCCGGGC AGCGTGGCCG AGAAGCTGGC CACCAGGGCC
GGCGTCATCC AGACCGAGGT GTTCCCGCTG ACGCTGTTCG CCATCGGCGG CATGCTGCTG
TTCCCGGCGG CCAACGACCT GTTGACGATG TTCATCGCCC TTGAGGTGTT GTCACTTCCG
CTGTACCTGC TGTGCGGGCT GGCCCGGCGG CGCCGTCTGC TGTCGCAGGA AGCCTCGCTG
AAGTACTTTC TGCTGGGGGC CTTCTCGTCC GCGATCTTTC TCTACGGCGC GGCGATGCTG
TACGGATATG CGGGCACCCT GCAGCTTGAC GGCATCGCCG ACGCGGTCGC TGCGGGTACC
GGCCGAACGT CGCTGGCGTT GATCGGCATC GCGCTGCTGC TCGTCGGCGT GTTGTTCAAA
GTCGGCGCGG TGCCGTTCCA TTCGTGGATC CCCGACGTGT ACCAGGGCGC ACCCACACCG
ATCACGGCGT TCATGGCGGC GGCCACCAAG ATCGCGGCGT TCGGCGCGAT GTTGCGCCTG
TTCTACGTGG CGCTGCCCGG GCTGCGCGAC GACTGGCGGC CGGTGCTGTG GGCGATCGCG
ATCTTGACGA TGGTGGTCGG CACCGTCACC GCCGTCACCC AGAACGACGT GAAACGCATG
CTGGGCTACT CCGCGGTCGC GCACAGCGGG TTCATCCTGA CCGGTGTGAT CGCCGGCAGC
GCGGCCGGGC TGTCGTCGAC GTTGTTCTAC CTGTTCGCAT ACGGGTTCTC CACCGTCGGT
GCGTTCGCCG TGGTGAGCCT GGTTCGCGAC GCCGACGGCG AAGAGGACAG CGCGATGGCG
CGCTGGGCCG GCCTCGGCAA GCGTTACCCC GTGGTGGGCA TCGTCTTTTC GCTGTTCCTG
CTGGCGTTCG CCGGGATCCC GCTGACGAGC GGATTCGTCA GCAAGTTCGC GGTGTTCAAG
GCCGCAGGCG AGGGCGGCGC GATCCCGCTC GTCGTCGTGG GCGTCATCGC AAGCGCGATC
GCCGCGTACT TTTACGTGCG GGTGATCATG TTGATGTTCT TCACCGACCG CCCCGACGAC
GCGCCGACGG TCGTCGTGCC CAGCGCGTTG ACGACCGCGG TCGTCACCGT CACCGCGGCC
GTCACGTTCG CCCTCGGGGC GCTGCCGCAA CCGTTGCTGG ACCTGGCGAA CGCTGCCGAC
CGGTTCCTCT GA
 
Protein sequence
MNIPTPTVEY GLISPMLIVL AAAVLGVLVE AFVPRGRRYA VQVTLSIAAL VASFVAVVLV 
ARDLHGGSGS EAVMGAIAVD MPALFLQGTI LVVGVLGILL IGERQISAPG PDTEGRGLEA
FTPQASAVPG SVAEKLATRA GVIQTEVFPL TLFAIGGMLL FPAANDLLTM FIALEVLSLP
LYLLCGLARR RRLLSQEASL KYFLLGAFSS AIFLYGAAML YGYAGTLQLD GIADAVAAGT
GRTSLALIGI ALLLVGVLFK VGAVPFHSWI PDVYQGAPTP ITAFMAAATK IAAFGAMLRL
FYVALPGLRD DWRPVLWAIA ILTMVVGTVT AVTQNDVKRM LGYSAVAHSG FILTGVIAGS
AAGLSSTLFY LFAYGFSTVG AFAVVSLVRD ADGEEDSAMA RWAGLGKRYP VVGIVFSLFL
LAFAGIPLTS GFVSKFAVFK AAGEGGAIPL VVVGVIASAI AAYFYVRVIM LMFFTDRPDD
APTVVVPSAL TTAVVTVTAA VTFALGALPQ PLLDLANAAD RFL