Gene Mvan_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1863 
Symbol 
ID4647878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1985413 
End bp1988172 
Gene Length2760 bp 
Protein Length919 aa 
Translation table11 
GC content70% 
IMG OID639805351 
Productregulatory protein, LuxR 
Protein accessionYP_952690 
Protein GI120402861 
COG category[R] General function prediction only 
COG ID[COG3899] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.12017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.973352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGGCG CTAGCGAGCG ATCAATCGAC GATCCGCACG TTGCTGGCTT CCTCGCCACC 
GCGAGATCGC AACCGGCCGG GCTGGTGATC GAAGGCGAAG CCGGGATCGG CAAGACCACC
CTCTGGCTGA CCGTGCGGCA GCGGGCGGGC GACCTCGGTT TCCGGGTGCT CACGGCGCGG
GCGGGGCAGG CCGAATCGGT GATGGCGTTC GCGGCCCTGG CCGACCTGCT CGACGACGTC
GGGGACGAGG TCTTCGCGCA GCTGCCCGGT CTGCAGCGGC TCGCGCTGGA CCGGGTGCTG
CTGCGAGCCG GCGGGGACGG CCCGCCGACG GATCAGCGGG TGGTGGCCGC CGCGTTCGTC
TCGGTGCTGC AGGCGTTGGC CGGGGAATCC CCGGTGCTCA TCGCCATCGA CGACGCGCAG
TGGCTCGACA GCTCCAGCCG CGCCGCGATC GAGTTCGCGG TGCGCCGGCT GCGGGGCCCG
TTCGGTGTGC TGGTGACCGA GCGGTGCGCA CCCGGGGAGG GCGCGACCGC GGGCTGGTTG
AAGCTGGACA GGCCGGACGC GCTCGAACGC GTCTACGTCC GCCCGATGAC CACCGGGCAG
CTGCACTCGC TGATCTCCGA ACGCCTCGGC CGCACACTGG CCCGCCCGTC GATTCTTCGG
ATCGCCGAGA TCTCCGGGGG CAACCCGTTT TTCGCGCTCG AGCTGGCCCT TGCGCTCAGC
GACGGGCAGG GCTCGGGTGA ACCGCCGCTG CCTGCCACGC TCGCCGATGT GGTGCGGCAC
CGGATCGGAC GGCTCGACGA ACAGACCAGG TCTGTGTTGC TCAGCATCGC CTGCGTGGCC
GATGCGACCG TGGAGCTGTT GGCCCGCGCC CACGACGTGA CCGCCGAGGA GGTGACCGAG
CGCCTCGAGC GCGTGGAGTC GACCGGCATC ATCACGGTCG AGGGCAACCG GGTGCGGTTC
ACCCATCCCC TGCTCGCCAG CGGCGTGTAC ACCGATGCCG GGCCGACGGC GCGGCGCGCG
ATGCACCGCA CGATGGGGGC GCTGGAGTCC CAGCCGGAAC TGAAGGCCCG GCATCTGGCG
CTGGCATCGG CCAGCGGTGA CGACGAGATC TTCACCGCCC TCGATCAGGC CGCCGACTCC
GCGCGGGCCC GTGGCGCGCC TGCGGCGGCC GCCGAGCTGA TGGACCTGGC CATCGGGCTC
GGTGCCGACG ACCCGTTGCG CCGGATGAAA TCGGCCGAGA ACCACTTCCT CGCCGGCGAC
ACCGCCAAAG CCGCCGCCGC ACTCGGCCGC ATCGACACGA TCGAACCGCC GGTCCTGCGC
GCGCTGGCGG CCAGCCTGCT CGCCACCGTG CGCATGTACG AGAACGAGCA CACCGAGGCG
GTCGAACTGC TGCGCGGCGC ACTGGACGAC GGTGCGGGCA ACGTACCGAT CCTGGTTCAG
GTACTGCTGC GACTGTCGTT CGCGCTCAAC AGCATCGGCG ACCTCGACGA CGCGGCCCGG
TATGTCCGCG ACGCGGTCAA GCTGGCGGAG GAACTCGGTG TACCCGGGAT CATCAGCGCC
GCGCTGGCGT GGTCGGTCCA CGTGAACATC CAGTGCGGCC GCGGGCTCGA CGAGGAATCG
CTGCGGCGCG CCATGGAGCT CTACGACAGC ACCCTCGATG TGCCGATCAT CTTCCGGGCG
CCGTTCGTGC ATGCGCTGGT GATGTCGTGG ACCGGCCGGC TCGAACAGGC GCACCGGGAA
CTGACGGCGA TGCGGGCGGT CTGCGTCGAG CGCGGCGCCG AGAGCGACAT GATGGCCATC
GCCGGGTTCC TGGCGATCAA TCATCTGTGG CGGGGTCAGA TCGCCGAAGC CGAGGCGGAG
GCCTCCGAAG CCGTGGAGCG CGCCGAACAA CTCGGCGGGG ACGACGTGTT GATCATCCCG
ATGACGGTGC GGGGGACGCT GGCCGCCTAC GCCGGCCGGG TGGAGGACGC CCGAGCGGAT
GCGCGGTGGG TGCTCGACGC GGTCAAGAAC CGTCAGACCT CCCACATCGC CGACTGGCCG
GGGATGACGC TGTGCTTTCT GGAGGAGTCA CTCAGGAATC ACCGGGAGGC GCTGCAGGCG
CTGGACGCGA AGTTCCTCGA CCCCAAACAG ATGCGGTCCA CGGAGCTGAT GTACGCCTGG
CACCTGCCCG ATGTCATCGA GGCGATGGTC GGCGTCGGAC GGCTCGACGA GGCCGAATCG
CTCACCGGCG CGCTCGAACA GAACGGGATC GAACACGACC GGCACTGGAT GAAGGCGGTG
GGGATGCGTT GCCGTGCCAT GCTTCTGGCC GCCCGTGGTG ACGTCATCGC CGCCGAGCAG
ACCGCGCACC GCGCGATGGC CGAGCATGAC CGTCTCCCGA TGCCGTTCGA ACGGGCCAGG
ACGCAACTGC TGTTGGGACA GCTGCAGCGG CGGCTACGCC AGAAGAACAC GGCCGCAACG
AATCTGAACG AGGCGCTGCG GACATTCGAA GAGATGGGCA CCCCGCTGTG GGTGCGGCGG
GCCCGTGCCG AGTTGGCGCG CGCCGTCGTC GCCCCTGCCG AAGGCCTGAG CCAGTTGACG
CCGTCCGAGC AGCGGGTCGC CGAGATGGCG GCCTCGGGCG CAACCAACAA GGACATCGCG
TCGGCGATGT TCATCAGCGC CAAGACCGTC GAGCACAATC TCACCAAGAT CTACCGCAAG
CTGGGCATCA GCTCGCGCGC CGAGTTGGGC AGGCGGATGG ACCGCGCGGG CGAACCCTAG
 
Protein sequence
MSGASERSID DPHVAGFLAT ARSQPAGLVI EGEAGIGKTT LWLTVRQRAG DLGFRVLTAR 
AGQAESVMAF AALADLLDDV GDEVFAQLPG LQRLALDRVL LRAGGDGPPT DQRVVAAAFV
SVLQALAGES PVLIAIDDAQ WLDSSSRAAI EFAVRRLRGP FGVLVTERCA PGEGATAGWL
KLDRPDALER VYVRPMTTGQ LHSLISERLG RTLARPSILR IAEISGGNPF FALELALALS
DGQGSGEPPL PATLADVVRH RIGRLDEQTR SVLLSIACVA DATVELLARA HDVTAEEVTE
RLERVESTGI ITVEGNRVRF THPLLASGVY TDAGPTARRA MHRTMGALES QPELKARHLA
LASASGDDEI FTALDQAADS ARARGAPAAA AELMDLAIGL GADDPLRRMK SAENHFLAGD
TAKAAAALGR IDTIEPPVLR ALAASLLATV RMYENEHTEA VELLRGALDD GAGNVPILVQ
VLLRLSFALN SIGDLDDAAR YVRDAVKLAE ELGVPGIISA ALAWSVHVNI QCGRGLDEES
LRRAMELYDS TLDVPIIFRA PFVHALVMSW TGRLEQAHRE LTAMRAVCVE RGAESDMMAI
AGFLAINHLW RGQIAEAEAE ASEAVERAEQ LGGDDVLIIP MTVRGTLAAY AGRVEDARAD
ARWVLDAVKN RQTSHIADWP GMTLCFLEES LRNHREALQA LDAKFLDPKQ MRSTELMYAW
HLPDVIEAMV GVGRLDEAES LTGALEQNGI EHDRHWMKAV GMRCRAMLLA ARGDVIAAEQ
TAHRAMAEHD RLPMPFERAR TQLLLGQLQR RLRQKNTAAT NLNEALRTFE EMGTPLWVRR
ARAELARAVV APAEGLSQLT PSEQRVAEMA ASGATNKDIA SAMFISAKTV EHNLTKIYRK
LGISSRAELG RRMDRAGEP