Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1863 |
Symbol | |
ID | 4647878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 1985413 |
End bp | 1988172 |
Gene Length | 2760 bp |
Protein Length | 919 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639805351 |
Product | regulatory protein, LuxR |
Protein accession | YP_952690 |
Protein GI | 120402861 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.12017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.973352 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGGCG CTAGCGAGCG ATCAATCGAC GATCCGCACG TTGCTGGCTT CCTCGCCACC GCGAGATCGC AACCGGCCGG GCTGGTGATC GAAGGCGAAG CCGGGATCGG CAAGACCACC CTCTGGCTGA CCGTGCGGCA GCGGGCGGGC GACCTCGGTT TCCGGGTGCT CACGGCGCGG GCGGGGCAGG CCGAATCGGT GATGGCGTTC GCGGCCCTGG CCGACCTGCT CGACGACGTC GGGGACGAGG TCTTCGCGCA GCTGCCCGGT CTGCAGCGGC TCGCGCTGGA CCGGGTGCTG CTGCGAGCCG GCGGGGACGG CCCGCCGACG GATCAGCGGG TGGTGGCCGC CGCGTTCGTC TCGGTGCTGC AGGCGTTGGC CGGGGAATCC CCGGTGCTCA TCGCCATCGA CGACGCGCAG TGGCTCGACA GCTCCAGCCG CGCCGCGATC GAGTTCGCGG TGCGCCGGCT GCGGGGCCCG TTCGGTGTGC TGGTGACCGA GCGGTGCGCA CCCGGGGAGG GCGCGACCGC GGGCTGGTTG AAGCTGGACA GGCCGGACGC GCTCGAACGC GTCTACGTCC GCCCGATGAC CACCGGGCAG CTGCACTCGC TGATCTCCGA ACGCCTCGGC CGCACACTGG CCCGCCCGTC GATTCTTCGG ATCGCCGAGA TCTCCGGGGG CAACCCGTTT TTCGCGCTCG AGCTGGCCCT TGCGCTCAGC GACGGGCAGG GCTCGGGTGA ACCGCCGCTG CCTGCCACGC TCGCCGATGT GGTGCGGCAC CGGATCGGAC GGCTCGACGA ACAGACCAGG TCTGTGTTGC TCAGCATCGC CTGCGTGGCC GATGCGACCG TGGAGCTGTT GGCCCGCGCC CACGACGTGA CCGCCGAGGA GGTGACCGAG CGCCTCGAGC GCGTGGAGTC GACCGGCATC ATCACGGTCG AGGGCAACCG GGTGCGGTTC ACCCATCCCC TGCTCGCCAG CGGCGTGTAC ACCGATGCCG GGCCGACGGC GCGGCGCGCG ATGCACCGCA CGATGGGGGC GCTGGAGTCC CAGCCGGAAC TGAAGGCCCG GCATCTGGCG CTGGCATCGG CCAGCGGTGA CGACGAGATC TTCACCGCCC TCGATCAGGC CGCCGACTCC GCGCGGGCCC GTGGCGCGCC TGCGGCGGCC GCCGAGCTGA TGGACCTGGC CATCGGGCTC GGTGCCGACG ACCCGTTGCG CCGGATGAAA TCGGCCGAGA ACCACTTCCT CGCCGGCGAC ACCGCCAAAG CCGCCGCCGC ACTCGGCCGC ATCGACACGA TCGAACCGCC GGTCCTGCGC GCGCTGGCGG CCAGCCTGCT CGCCACCGTG CGCATGTACG AGAACGAGCA CACCGAGGCG GTCGAACTGC TGCGCGGCGC ACTGGACGAC GGTGCGGGCA ACGTACCGAT CCTGGTTCAG GTACTGCTGC GACTGTCGTT CGCGCTCAAC AGCATCGGCG ACCTCGACGA CGCGGCCCGG TATGTCCGCG ACGCGGTCAA GCTGGCGGAG GAACTCGGTG TACCCGGGAT CATCAGCGCC GCGCTGGCGT GGTCGGTCCA CGTGAACATC CAGTGCGGCC GCGGGCTCGA CGAGGAATCG CTGCGGCGCG CCATGGAGCT CTACGACAGC ACCCTCGATG TGCCGATCAT CTTCCGGGCG CCGTTCGTGC ATGCGCTGGT GATGTCGTGG ACCGGCCGGC TCGAACAGGC GCACCGGGAA CTGACGGCGA TGCGGGCGGT CTGCGTCGAG CGCGGCGCCG AGAGCGACAT GATGGCCATC GCCGGGTTCC TGGCGATCAA TCATCTGTGG CGGGGTCAGA TCGCCGAAGC CGAGGCGGAG GCCTCCGAAG CCGTGGAGCG CGCCGAACAA CTCGGCGGGG ACGACGTGTT GATCATCCCG ATGACGGTGC GGGGGACGCT GGCCGCCTAC GCCGGCCGGG TGGAGGACGC CCGAGCGGAT GCGCGGTGGG TGCTCGACGC GGTCAAGAAC CGTCAGACCT CCCACATCGC CGACTGGCCG GGGATGACGC TGTGCTTTCT GGAGGAGTCA CTCAGGAATC ACCGGGAGGC GCTGCAGGCG CTGGACGCGA AGTTCCTCGA CCCCAAACAG ATGCGGTCCA CGGAGCTGAT GTACGCCTGG CACCTGCCCG ATGTCATCGA GGCGATGGTC GGCGTCGGAC GGCTCGACGA GGCCGAATCG CTCACCGGCG CGCTCGAACA GAACGGGATC GAACACGACC GGCACTGGAT GAAGGCGGTG GGGATGCGTT GCCGTGCCAT GCTTCTGGCC GCCCGTGGTG ACGTCATCGC CGCCGAGCAG ACCGCGCACC GCGCGATGGC CGAGCATGAC CGTCTCCCGA TGCCGTTCGA ACGGGCCAGG ACGCAACTGC TGTTGGGACA GCTGCAGCGG CGGCTACGCC AGAAGAACAC GGCCGCAACG AATCTGAACG AGGCGCTGCG GACATTCGAA GAGATGGGCA CCCCGCTGTG GGTGCGGCGG GCCCGTGCCG AGTTGGCGCG CGCCGTCGTC GCCCCTGCCG AAGGCCTGAG CCAGTTGACG CCGTCCGAGC AGCGGGTCGC CGAGATGGCG GCCTCGGGCG CAACCAACAA GGACATCGCG TCGGCGATGT TCATCAGCGC CAAGACCGTC GAGCACAATC TCACCAAGAT CTACCGCAAG CTGGGCATCA GCTCGCGCGC CGAGTTGGGC AGGCGGATGG ACCGCGCGGG CGAACCCTAG
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Protein sequence | MSGASERSID DPHVAGFLAT ARSQPAGLVI EGEAGIGKTT LWLTVRQRAG DLGFRVLTAR AGQAESVMAF AALADLLDDV GDEVFAQLPG LQRLALDRVL LRAGGDGPPT DQRVVAAAFV SVLQALAGES PVLIAIDDAQ WLDSSSRAAI EFAVRRLRGP FGVLVTERCA PGEGATAGWL KLDRPDALER VYVRPMTTGQ LHSLISERLG RTLARPSILR IAEISGGNPF FALELALALS DGQGSGEPPL PATLADVVRH RIGRLDEQTR SVLLSIACVA DATVELLARA HDVTAEEVTE RLERVESTGI ITVEGNRVRF THPLLASGVY TDAGPTARRA MHRTMGALES QPELKARHLA LASASGDDEI FTALDQAADS ARARGAPAAA AELMDLAIGL GADDPLRRMK SAENHFLAGD TAKAAAALGR IDTIEPPVLR ALAASLLATV RMYENEHTEA VELLRGALDD GAGNVPILVQ VLLRLSFALN SIGDLDDAAR YVRDAVKLAE ELGVPGIISA ALAWSVHVNI QCGRGLDEES LRRAMELYDS TLDVPIIFRA PFVHALVMSW TGRLEQAHRE LTAMRAVCVE RGAESDMMAI AGFLAINHLW RGQIAEAEAE ASEAVERAEQ LGGDDVLIIP MTVRGTLAAY AGRVEDARAD ARWVLDAVKN RQTSHIADWP GMTLCFLEES LRNHREALQA LDAKFLDPKQ MRSTELMYAW HLPDVIEAMV GVGRLDEAES LTGALEQNGI EHDRHWMKAV GMRCRAMLLA ARGDVIAAEQ TAHRAMAEHD RLPMPFERAR TQLLLGQLQR RLRQKNTAAT NLNEALRTFE EMGTPLWVRR ARAELARAVV APAEGLSQLT PSEQRVAEMA ASGATNKDIA SAMFISAKTV EHNLTKIYRK LGISSRAELG RRMDRAGEP
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