Gene Mvan_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1824 
Symbol 
ID4644081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1946042 
End bp1947547 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content67% 
IMG OID639805313 
Productmethylmalonate-semialdehyde dehydrogenase 
Protein accessionYP_952652 
Protein GI120402823 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID[TIGR01722] methylmalonic acid semialdehyde dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.351219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CAATTTCCCA TTGGGTCAAC GGCGAGGTTT TCACCGGCAC CAGCAGCGCT 
TCTGCGCCGG TGACCAACCC GGCCACCGGC ACGGTGACCG GACAGGTCGC GCTGGCCTCG
GTGGACGACG CGCGTGCGGT GATCGACGCG GCGGCCGCGG CGTTCCCGGC CTGGCGTGAC
GCCTCACTGG CCAAAAGGAC TTCGGTGCTC TTTCGATTCA GAGAGCTTCT CAACGAGCGC
AAGGGCGAAC TGGCCGAGAT CATCACCGCC GAGCACGGCA AGGTCGTCTC GGATGCGTTG
GGTGAAGTGT CGCGCGGCCA GGAAGTGGTC GAGTTCGCCT GCGGCATCCC CCATTTGCTC
AAGGGCGGAT TCACCGAGAA CGCGTCGACC AAGGTCGACG TCTACTCCAT CCGTCAGCCG
CTGGGCCCGG TCGCGGTCAT CTCCCCGTTC AACTTCCCGG CCATGGTCCC GATGTGGTTC
TTCCCGATTG CCATCGCCAC CGGCAACACC GTGGTGCTGA AGCCGTCGGA GAAGGATCCG
TCGGCCTCGC TGTGGCTGGC CGCGTTGTGG AAGGAAGCCG GGCTGCCCGA CGGGGTGTTC
AACGTGCTCC AGGGCGACAA GACCGCCGTC GACGAACTGC TGGCCAACCC CAAGATCAAG
TCCGTGTCGT TCGTCGGGTC GACCCCGATC GCGCAGTACG TCTACGCCAC CGGCACCGCG
GCGGGCAAGC GCGTGCAGGC CCTGGGCGGC GCGAAGAACC ACGCCGTGAT CCTGCCCGAC
GCCGATCTCG ACCTGGCCGC CGATGCGATG GTCAACGCCG GCTTCGGCTC GGCCGGGGAA
CGCTGCATGG CGATCAGCGC CTGCGTGGCC GTCGGCCCGA TCGCCGATGA CCTGGTGGCC
AAGATCCGCG AGCGCACCGT CGGTTTGAAG ATCGGTGACG GCACCAAGGA ATCCGACATG
GGCCCGCTGG TCACCCAGGC GCACCGCGAC AAGGTCGCCT CCTACATCGA CGCCGGCGAA
GCCGACGGCG CCAAGGTCGT CGTCGACGGG CGCAGCGTCG GTAGCGAGGG CGCGCCCGAG
CGGGATCCAG CCGGATTCTG GCTCGGCCCC ACCCTGCTCG ACAACGTCAC CCCCGAGATG
AGCGTGTACA CCGACGAGAT CTTCGGCCCC GTGCTGTCGG TGCTGCGCGT GGAGAGCTAC
GACCAGGCCC TGGAGTTGAT CAACACCAAC CCCTATGGCA ACGGTACGGC GATCTTCACC
AACGACGGCG GCGCCGCCCG GCGCTTCCAG AACGAGGTCG AGGTCGGCAT GGTCGGCATC
AACGTGCCCA TCCCGGTGCC GATGGCCTAC TTCAGCTTCG GTGGCTGGAA GGCCTCCCTG
TTCGGCGACT CCCACGCCCA CGGCATGGAC GGTGTGCAGT TCTTCACCCG CCAGAAGGCC
GTCACCCAGA GATGGTTGGA TCCCAGCCAC GGCGGCATCA ACCTCGGTTT CCCCCAAAAC
GGCTGA
 
Protein sequence
MTATISHWVN GEVFTGTSSA SAPVTNPATG TVTGQVALAS VDDARAVIDA AAAAFPAWRD 
ASLAKRTSVL FRFRELLNER KGELAEIITA EHGKVVSDAL GEVSRGQEVV EFACGIPHLL
KGGFTENAST KVDVYSIRQP LGPVAVISPF NFPAMVPMWF FPIAIATGNT VVLKPSEKDP
SASLWLAALW KEAGLPDGVF NVLQGDKTAV DELLANPKIK SVSFVGSTPI AQYVYATGTA
AGKRVQALGG AKNHAVILPD ADLDLAADAM VNAGFGSAGE RCMAISACVA VGPIADDLVA
KIRERTVGLK IGDGTKESDM GPLVTQAHRD KVASYIDAGE ADGAKVVVDG RSVGSEGAPE
RDPAGFWLGP TLLDNVTPEM SVYTDEIFGP VLSVLRVESY DQALELINTN PYGNGTAIFT
NDGGAARRFQ NEVEVGMVGI NVPIPVPMAY FSFGGWKASL FGDSHAHGMD GVQFFTRQKA
VTQRWLDPSH GGINLGFPQN G