Gene Mvan_1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1812 
Symbol 
ID4644068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1923803 
End bp1925200 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content69% 
IMG OID639805300 
Producthypothetical protein 
Protein accessionYP_952640 
Protein GI120402811 
COG category[S] Function unknown 
COG ID[COG5282] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03624] putative hydrolase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.067154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGTA CCGTTGGGGG CATGGCTGAC CTGCCTTTCG GCTTCTCCGC CGGGGACGAC 
CCCGACCGCG ACAAACGCAA GAACGACAAC CCCGACTCAG GACCAGGATC GGGTGGGGAC
CCGTTCGGCT CGGGTTTCCC CGGCGGCGAG TTCGACATGT CGCAGCTGGG CCAGATCTTC
TCCAAGCTCG GCGAGATGTT CAGCGGGGCG GGCACGTCGA TGGCCGGCGG CACGTCCGCC
GGACCGGTGA ACTACGACCT GGCGCGTCAG CTGGCGTCGA GCTCGATCGG ATTCGTGGCG
CCGATACCCG AGCAGACCGC CACCGCCATC TCCGATGCGG TGCGGCTGGC CGAGACCTGG
CTCGACGGTG TCACCCCGTT ACCGGCCGGC ACCACCAGGG CTGTCGCATG GACGCCGACG
GACTGGATCG ACAACACCAT GGACACCTGG AAGCGGCTGT GCGACCCGGT GGCCCAGCAG
ATCTCGACGG TGTGGGCGCA GGCGTTACCC GAGGAGGCCA AGGCGATGGC CGGTCCGCTG
CTGGCGATGA TGTCGCAGAT GGGCGGGATG GCGTTCGGCT CCCAGCTGGG GCAGGCGCTG
GGCACGCTGT CGAAGGAGGT GCTGACGTCC ACCGATATCG GTCTTCCGTT GGGCCCCAAG
GGGATCGCCG CGCTGATGCC CGAGGCGATC GAGGCGCTGG CCGAGGGGCT GGAGCAGCCG
CGCAGCGAGA TCGTCACGTT CCTGGCCGCC CGCGAGGCCG CCCACCACCG GCTGTTCAGC
CATGTGCCGT GGCTGCCCGG CCAGCTGCTC AACGCGGTCG AGGCGTTCGC CAGGGGCACC
AAGATCGACA TGAGCGGCAT CGAGGAGTTC GCCCGCGGCT TCAACCCGGC GTCGCTGACC
GATCCGTCGG AGATGGAGCA GCTGCTCAAT CAGGGCATCT TCGAACCAAA GGCCACCCCG
GAGCAGACGG CGGCCCTGGA GCGACTGGAG ACCACGCTGG CGTTGATCGA GGGCTGGGTG
CAGACCGTCG TTTCCGACGC ACTCGGCGAC CGTATCCCCG GCACGCCCGC GTTGAGTGAG
ATGCTGCGCC GCCGGCGCGC GACCGGCGGA CCGGCCGAGC AGACGTTCGC CACCCTGGTC
GGGCTGGAGT TGCGGCCCCG CAAGATGCGC GAGGCAGCCG ACCTGTGGCG CAAGCTGACC
GAGGCCGTCG GCGCGGACAC CCGCGACAGC GTCTGGCAGC ACCCCGACCT GCTACCGAGC
GCAGGCGACC TGGACGAGCC CGCCGCGTTC ATCGACCGCA TGATCGGCGG GGACACCAGC
GACCTCGACA ATGCGATCGC CGACCTCGAG CGTGACTTGA GGCGAGGGGA CGCCGGGCCT
GACGAACCCA GGGACTGA
 
Protein sequence
MVSTVGGMAD LPFGFSAGDD PDRDKRKNDN PDSGPGSGGD PFGSGFPGGE FDMSQLGQIF 
SKLGEMFSGA GTSMAGGTSA GPVNYDLARQ LASSSIGFVA PIPEQTATAI SDAVRLAETW
LDGVTPLPAG TTRAVAWTPT DWIDNTMDTW KRLCDPVAQQ ISTVWAQALP EEAKAMAGPL
LAMMSQMGGM AFGSQLGQAL GTLSKEVLTS TDIGLPLGPK GIAALMPEAI EALAEGLEQP
RSEIVTFLAA REAAHHRLFS HVPWLPGQLL NAVEAFARGT KIDMSGIEEF ARGFNPASLT
DPSEMEQLLN QGIFEPKATP EQTAALERLE TTLALIEGWV QTVVSDALGD RIPGTPALSE
MLRRRRATGG PAEQTFATLV GLELRPRKMR EAADLWRKLT EAVGADTRDS VWQHPDLLPS
AGDLDEPAAF IDRMIGGDTS DLDNAIADLE RDLRRGDAGP DEPRD