Gene Mvan_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1800 
Symbol 
ID4647436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1908483 
End bp1909265 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content70% 
IMG OID639805288 
Productalpha/beta hydrolase fold 
Protein accessionYP_952628 
Protein GI120402799 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.155348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACC TGTTGTGCAC CTACCGATTC GGACCGCCCG GGCCTGCCCG GGTGCTGGCG 
ATCCACGGGC TGACCGGACA CGGCAAGCGC TGGGAGACCC TGTTCACCCG TCATCTGCCC
GACGTCACCG CGCTCGCCCC CGACCTGCTG GGCCACGGCC GGTCGTCATG GGATGCGCCG
TGGACCATCG ATGCCAACGT GGCGGCGCTG GCCGCGCTGG TCGACGCCGA GGCCGACGGC
CCCGTGGTGG TCGTCGGGCA CTCGTTCGGC GGCGCCATCG CGTTGAACCT CGCCGCGGTG
CGGCCGGATC TGGTGGCCGG GCTCGTGCTG CTGGATCCGG CGGTGGCACT GGACGGACGC
TGGATGCGCG AGGTCGCCGA CGACATGTAC AACTCCCCCG ATTACACCGA CCGCGAGGAG
GCCCGCCAGG AGAAGATCGG CGGATCGTGG GGTGAGGTCG CCGAGGACGA ACTGGACCGC
GAACTCGACG AGCACCTCGT CGAGCAAACC GACGGCCGGG TCGGCTGGCG CATCAGCATC
CCCGCGACGC TGTCCTATTG GAGCGAGCTG ACGCGTGCCG TACCGGTACC GCGGGACGGG
ACACCGACGA CGCTGGTGCG CGCCACCCAC ACCGATCCGC CGTATGCCAG CGACGAACTG
ATCGCCACGC TGGATGCCGG GCTGGGGGCG AGTCTGACGG TGTTGGAGTG GGATTGCGAC
CACATGGTGC CGCTGGCCAA GCCTGCCGAG ACGGCCGCGG CGATTCGGGA CCGCCTGGTC
TGA
 
Protein sequence
MTDLLCTYRF GPPGPARVLA IHGLTGHGKR WETLFTRHLP DVTALAPDLL GHGRSSWDAP 
WTIDANVAAL AALVDAEADG PVVVVGHSFG GAIALNLAAV RPDLVAGLVL LDPAVALDGR
WMREVADDMY NSPDYTDREE ARQEKIGGSW GEVAEDELDR ELDEHLVEQT DGRVGWRISI
PATLSYWSEL TRAVPVPRDG TPTTLVRATH TDPPYASDEL IATLDAGLGA SLTVLEWDCD
HMVPLAKPAE TAAAIRDRLV