Gene Mvan_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1754 
Symbol 
ID4647050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1861592 
End bp1863349 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content71% 
IMG OID639805243 
Productlipoprotein LpqB 
Protein accessionYP_952583 
Protein GI120402754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.390058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACGCA TCGCCGCGCT GTGGCTCTGC GCGCTCATGG TTTTCGCGGT CGGCTGCGCC 
GGAGTGCCCA GCTCGTCGTC GCCGCAGGCG ATCGGAACCG TCGACCGGCC CGCGCCGCCC
AGCCTCCCCA AACCGACCCC GGCCATGGAC CCCGACGTCC TGCTGCGCGA ATTCCTCAAA
GCCACAGCCG ATCCGGCGAA CCGGCACCTG GCGGCGCGCC AGTTCCTCAC CGAGTCGGCG
TCCAGCACCT GGGACGACGC CGGCAGCGCG CTGCTGATCG ACAACGTGGT GTTCGTCGAA
ACGCGGGCAC CCGAACGGGT TTCGGTGACC ATGCGCGCCG ATATCCTCGG GTCGCTGTCC
GACATGGGCG TCTTCGAGAC CGGCGCAGGC GCGCTGCCTG ACCCCGGTCC GATCGAACTC
GTCAAGACGC CGGACGGCTG GCGCATCGAC CGGTTGCCCA ACGGCGTCTT CCTGGACTGG
CAGCAGTTCC AGGCCACCTA CAAGCGGCAC ACGCTGTACT TCGCCGACCC GACCGGCAAG
ACCGTCGTAC CCGACCCACG CTACGTCGCG GTGTCCGAAC CCGACCAGCT GGCAACCGAA
TTGGTGAGCA AGCTGGTGGC AGGACCCCGA CCCGAGATGG ACAAGACGGT GCGCAACCTG
CTCGGCTCGC CGCTGCGGCT GCGTGGCCCG GTGACCCGGG CCGACGGCGG CAAGACCGGG
GTGGGCCGCG GCTACGGCGG CGCCCGCGTC GACCTGGAGA ACCTGTCCAC CACTGATCCG
CACAGCAGGC AGTTGCTTGC CGCGCAGCTG ATCTGGACGC TGTCGCGGTC CGGGATCAAC
GGGCCGTACG TGCTCAACGC CGACGGCGCC GCCCTCGACG ACCGGTTCGC CGAAGGGTGG
GACACCGCCG ACGTCGCGGC GACCGATCCC GGTGCCGCCG ACGGCGCGGC GGCCGGCCTG
CACGCTCTGG TCGGTGGATC GCTGGTCCGC CTCGACGGGC AACGGGCGCC GCGGGTTTCG
GGCCAGTTCG GCCAGATGCC GGGGCAGACC GCGGCGTCGC TGTCGCGGAC CGGGCAGGAG
GTCGCATCGA TCGTCACGCT GCGCCCCGGT GCGCCCGACA TGGCGTCGTC GCTGTGGGTG
GGGCCGTTGG GCGGCAACGC ATCCCAGGTG TTGGACGGCC GCAGCCTGAC CAGGCCGAGC
TGGTCGCTCG ACGACGCGAT CTGGACGGTC GTCGACGGCA ACAACGTGGT GCGCGTGATC
CAGGACGCGT CGGGGCAGCC TGCCCGCATC CCGGTCGATG CGAGCGCAGT CGTCACGCGT
TTCCCGGGTG CGATCGCCGA ACTGCAGCTC TCGCGCGACG GCACCCGCGC CGCCATGGTG
ATCGAAGGCA AGATCGTCCT CGCCGGGGTC GAGCAGACCG CAGGCGGAAA CTACGCGCTG
ACCTACCCGC GGCGACTGGG TTACGGGCTG GGGGAGACGG CGGTGTCGCT GTCGTGGCGC
ACGGGCGACG ACATCGTCGT CACGCGCACC GTTGCGCAGA GCCCGGTGTC CTACGTCAAC
CTCGACGGGG TGAACTCCGA CGGGCCCAGC CGCAACCTGC TGATGCCGGT CAAGACGGTG
GCCGCCAACC CGTCGGCGGT GTACGTCGCC GACGGCCGCG GGATACTGCA GCTGTCCGGT
TCGGCCGCCG AAGACCCGGG GTGGTCGGAG GTGCGGCCGT TGATGTCGGC AGGCGCGCTG
CCGGTGCTGC CGGGCTGA
 
Protein sequence
MRRIAALWLC ALMVFAVGCA GVPSSSSPQA IGTVDRPAPP SLPKPTPAMD PDVLLREFLK 
ATADPANRHL AARQFLTESA SSTWDDAGSA LLIDNVVFVE TRAPERVSVT MRADILGSLS
DMGVFETGAG ALPDPGPIEL VKTPDGWRID RLPNGVFLDW QQFQATYKRH TLYFADPTGK
TVVPDPRYVA VSEPDQLATE LVSKLVAGPR PEMDKTVRNL LGSPLRLRGP VTRADGGKTG
VGRGYGGARV DLENLSTTDP HSRQLLAAQL IWTLSRSGIN GPYVLNADGA ALDDRFAEGW
DTADVAATDP GAADGAAAGL HALVGGSLVR LDGQRAPRVS GQFGQMPGQT AASLSRTGQE
VASIVTLRPG APDMASSLWV GPLGGNASQV LDGRSLTRPS WSLDDAIWTV VDGNNVVRVI
QDASGQPARI PVDASAVVTR FPGAIAELQL SRDGTRAAMV IEGKIVLAGV EQTAGGNYAL
TYPRRLGYGL GETAVSLSWR TGDDIVVTRT VAQSPVSYVN LDGVNSDGPS RNLLMPVKTV
AANPSAVYVA DGRGILQLSG SAAEDPGWSE VRPLMSAGAL PVLPG