Gene Mvan_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1729 
Symbol 
ID4647251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1836924 
End bp1838003 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content69% 
IMG OID639805218 
Productnucleotidyl transferase 
Protein accessionYP_952558 
Protein GI120402729 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.442987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.868818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCAATC CAGCTGAGGT CGATGCGGTC GTGTTGGTCG GCGGCATGGG CACGCGCCTG 
CGTCCGCTGA CGTTGTCGGC GCCCAAGCCG ATGCTGCCGA CCGCCGGGTT GCCGTTCCTG
ACGCATCTGC TGTCGCGGAT CGCCGACGCC GGCATCGAGC ACGTCGTGCT CGGCACGTCG
TACAAGGCCA ACGTGTTCGA GTCCGAGTTC GGGGACGGCT CCAAGCTCGG TCTGCAGATC
GACTACGTCG TCGAGGACGA ACCGCTTGGC ACCGGCGGCG GCATCGCCAA CGTCGCCTCG
AAGCTGCGCT ACGACACCGC GGTGGTGTTC AACGGCGACG TGTTGTCCGG TTGCGACCTG
CGCGCGCTGC TGGACTCGCA CGTTTCCCGC GACGCCGATG TCACGCTGCA CCTGGTGCGT
GTCGGCGACC CGCGCGCATT CGGTTGTGTG CCAACCGATT CCGACGGCAA TGTGACCGCG
TTCCTGGAGA AGACGCAGGA CCCGCCGACC GATCAGATCA ACGCAGGCTG CTACGTGTTC
AAGCGCTCGG TGATCGACGC CATCCCCAAA GGCCGTGCGC TGTCGGTGGA ACGCGAGATC
TTCCCGCAGC TGCTGTCCGA CGGTAAGCGG GTGTGCGGCT ACGTCGACGC CACCTACTGG
CGCGACATGG GTACCCCTGA GGATTTCGTG CGCGGCTCGG CGGATCTGGT GCGTGGCATC
GCACCGTCGC CGGCGCTGCA TGGCCATCGC GGGGAAAGCC TTGTCCACGA CGGTGCTTCG
GTGGCCCCCG GCGCGCTGCT GATCGGTGGC ACGGTGGTCG GGCGCGGCGC GGAGGTCGCC
GGCGGGGCCC GGCTGGACGG CGCGGTGATC TTCGACGGCG TGAAAATCGG TGCGGGCGCG
GTGATCGAGC GCTCGATCAT TGGCTTCGGC GCGCGCATCG GCCCGCGCGC GCTGATCCGC
GACGGCGTGA TCGGTGACGG CGCGGACATC GGCGCCCGCT GCGAGCTGCT GCGTGGTGCA
CGCGTGTGGC CGGGCATCAC GATCCCCGAC GGCGGCATCC GCTTCTCGAC CGACATCTAG
 
Protein sequence
MVNPAEVDAV VLVGGMGTRL RPLTLSAPKP MLPTAGLPFL THLLSRIADA GIEHVVLGTS 
YKANVFESEF GDGSKLGLQI DYVVEDEPLG TGGGIANVAS KLRYDTAVVF NGDVLSGCDL
RALLDSHVSR DADVTLHLVR VGDPRAFGCV PTDSDGNVTA FLEKTQDPPT DQINAGCYVF
KRSVIDAIPK GRALSVEREI FPQLLSDGKR VCGYVDATYW RDMGTPEDFV RGSADLVRGI
APSPALHGHR GESLVHDGAS VAPGALLIGG TVVGRGAEVA GGARLDGAVI FDGVKIGAGA
VIERSIIGFG ARIGPRALIR DGVIGDGADI GARCELLRGA RVWPGITIPD GGIRFSTDI