| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1718 |
|---|
| Symbol | |
|---|
| ID | 4648102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 1820329 |
|---|
| End bp | 1822662 |
|---|
| Gene Length | 2334 bp |
|---|
| Protein Length | 777 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639805207 |
|---|
| Product | putative outer membrane adhesin like proteiin |
|---|
| Protein accession | YP_952547 |
|---|
| Protein GI | 120402718 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01965] VCBS repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCTCGT CGCCGGGCAT CGCGTGGGCC GATCCGGACA CGTCATCATC GCCGAGCACG
GACACTGCCA CGGCTTCGCC GGCCGACGCC GGGCAGTCCG TCACTCCGAC GCGAACTGAT
GCGGAGACCG ACACTGAAAA GGAGTCGCTG TCCGACAACG AGGACGGTGA CGAGCCGACT
GACGACGTCC TCACTGAATC CGAAGACGAC ACCGAGGCAC CACCGACGGA CGACGATGCC
CCGGCTTCGT CGGACCGCGA CACCGCGGTG TCATCGCTGA CGCGCACCGC CGAGGACAAG
TCCGGGGACG CCGAGGACGA CGAACCCGTG GCGGTGGATC TGTCGGAGCT GGACGATGCC
GAGGCTGAGG CGCAGGCCGT GCCGACCGAT GCGCTCGACG TCGAACCCGT CGTCGACGCC
ACGACGGTGA CACCGTTGGC CGCACCGGTG GCGGTGATCT CCGACGTCGC AGCCGCGACG
CCGACCACGG AGTCCACGAC CGTCACCGGC CTGTTGGCGA CCGTGTTGGC GCCCCTTGTC
CCGCCGAATC CGGACGCGCC CACTGACTCG CCGCTGGTGC TCGCACTGTG GGCCGCGGCA
CGTCGCCCGT CCGAGTCGGC CGCGTCCCAG AAGTCCGCGG CCGCCGGAAC ATCGGCCCTC
ACCGCGGCCG TGCCCAACAG CCAGCCGTCG ATCACCTCGA CTCGGGTCAG CTCGCCGGGG
TGGTTCACCG CCAAGGTCAC CGGCCAGGTC CGCGCCACCG ACCCCGACCG CGACAAACTC
ACCTTCACCG CCGCGCCGGT CGGCTCCGGC AACGTCACCG TCAACTCGCG GGGCTCGTTC
ACCTACACCC CCAGCGCGGC GGCCCGCCAC GCCGCGGCAG CCACCAGCGG CGAGGACCGG
GACACGGTCG CCATCACCGT CAGCGACGGC TACGGCGGCT CGATCACCAC CTACCTGAAC
GTCACGATCC GCCCCGCCAA CTCCGCACCG AGAGCGAAAG CGATTGTCGG AAAAGGCAAT
CCATCGAACA GTGTGGTGAC CGGCAAAATC AGCGCCACCG ACCGGGACGG CGACGCGCTC
ACCTTCACCG GGCCGGGCGC AACCCCGCGC GGGAATGTCG TCGTCAAGGC CGACGGCAGC
TTCGTCTACA CCCCCACCGC CGCCGCGCGC GACGCGGCGA GCAGCCCGTT CAAGCGATCT
GACCGCTTCA CCGTGACCGT CAACGACGGC CACGGCGGTA CCGACACCGT CACGGTGCGG
GTCCGGATCG TCACCCCGGA GGGCAACCGT GCCCCGAAGG CCGGCAGCCC CGCGTACACC
ATCACCGGCG TCGCCGACGC CAACGGCCAG GTCACCGGGC GCGTCAACGT CACCGATCCC
GACGGCTTCG CACTGACCTA CGGCCTGGCC GCCGGCGTCG ACTCCAACGT CGGCACCGTC
ACCGTCGACG CCACCACCGG TGCGTTCTCC TTCACCCCCA CCACTCAGGC CCGGGAAAAC
GCCCACGGCA CCCCGGGCGA AGACACCGTC CGCTTCACCG TCGCCGCCAG CGACGGATTG
GCCAGCGCTA CAGTCCAAAT CGCGGCACCG ATCAGCGCCA AGGCGCCGAC CCCGCCGCCG
CCCCCACCGC CCTCCGACCC GACCTTCGCC CAGCGGGTCG CCTCCTTCGT GTCGAACAAC
TACGGCAAGA CGGTGGCCAA CGCGCAGGGG ACGTACGCCG GTGAGTGCGT CTCGCTGGTG
AGCCAGTTCC TCCGGCAGGT CCACAACATC ACCACCGCAG CGTGGGGCAA TGCGGTGGAC
TACCGCGCCG GCGGCACCGG TGGCGCCCAG TTGGCGGCGC GTGGCTTCAC CTGGCACACC
GACAAGAACT TCCAGAACGG TGACATCCTG GTCTGGGGTG GGGGCACCTA CACCACCAGC
TATGGTCACA TCGGCATCTG GCACAACGGC AAGACGTTCG ACCAGAACAG CGGCTGGCAC
CGCGACGTCG GAGAACGACA GTCGGGCTAC TCGCAGTTCT TCTCCCAGGG CTACCTCGGC
TACTGGCGCA AGTCCGGCAC CTCAGGCGGC GGCGGGGGTG GCGGCGCCAC GAGCGGGACC
AAGAGCGGCA CCGGGACCGT CGTCACCCTG GTCAACGTCC GCAACGACCC CAGCACGAAC
GGGCCGGTCA TCGCGCAGTA CAGCCCGGGC CAGACGTTCA ACTACGACAG CTGGGTGATC
GGGAACGGCT ATTACTGGCT CTCATACGTG AGCTATTCGG GCACGCGCCG CTACGTCGCG
GAGGCAACCC TCGATCACAG CATCGTCTAC GTACGAGGCG GAGCGTTCCA CTAG
|
|---|
| Protein sequence | MASSPGIAWA DPDTSSSPST DTATASPADA GQSVTPTRTD AETDTEKESL SDNEDGDEPT
DDVLTESEDD TEAPPTDDDA PASSDRDTAV SSLTRTAEDK SGDAEDDEPV AVDLSELDDA
EAEAQAVPTD ALDVEPVVDA TTVTPLAAPV AVISDVAAAT PTTESTTVTG LLATVLAPLV
PPNPDAPTDS PLVLALWAAA RRPSESAASQ KSAAAGTSAL TAAVPNSQPS ITSTRVSSPG
WFTAKVTGQV RATDPDRDKL TFTAAPVGSG NVTVNSRGSF TYTPSAAARH AAAATSGEDR
DTVAITVSDG YGGSITTYLN VTIRPANSAP RAKAIVGKGN PSNSVVTGKI SATDRDGDAL
TFTGPGATPR GNVVVKADGS FVYTPTAAAR DAASSPFKRS DRFTVTVNDG HGGTDTVTVR
VRIVTPEGNR APKAGSPAYT ITGVADANGQ VTGRVNVTDP DGFALTYGLA AGVDSNVGTV
TVDATTGAFS FTPTTQAREN AHGTPGEDTV RFTVAASDGL ASATVQIAAP ISAKAPTPPP
PPPPSDPTFA QRVASFVSNN YGKTVANAQG TYAGECVSLV SQFLRQVHNI TTAAWGNAVD
YRAGGTGGAQ LAARGFTWHT DKNFQNGDIL VWGGGTYTTS YGHIGIWHNG KTFDQNSGWH
RDVGERQSGY SQFFSQGYLG YWRKSGTSGG GGGGGATSGT KSGTGTVVTL VNVRNDPSTN
GPVIAQYSPG QTFNYDSWVI GNGYYWLSYV SYSGTRRYVA EATLDHSIVY VRGGAFH
|
|---|
| |