| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1706 |
|---|
| Symbol | |
|---|
| ID | 4648090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 1811810 |
|---|
| End bp | 1813207 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639805196 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_952536 |
|---|
| Protein GI | 120402707 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1232] Protoporphyrinogen oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.186838 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCC CCCGCAGCCC GCTGATCATC GGCGCAGGCC CCGCCGGCCT GACCGCCGCC
CTGGAGCTGA TGAACCGGGG CGTGACACCG CGCCTCTACG AAGCCTCGGC CGAAGTCGGT
GGCCTGGCCC GCACCCCGAC CGACGGCGAC TGGCGCATCG ACCCCGGCGG TCACCGGTTC
TTCACCCGCA ACGAAGACAT CATGGACCTG TGGAAGTGCC TGCTGCCGCA CGACCAGTGG
CTGGTGGTCG GGCGCCGCTC GGCCATGCTG GTCGGCGGGT ACTACGTGCG CTATCCGCTG
CTCGGCCGAG ACCTGTTGAC CCAGATGGGA TATCGGCGCG GCCTGCGCGG CCTCAGCAGC
CTGGCGTGGT CGCGGCTCAA GCGCAACTTC CGGCTCAACG ACCGCGACGA GAACTTCCGG
CAATGGGGTG TCGGCGAATT CGGCAGGCAC TGGTACGAGA TGTTCTTCGA CGGCTACGTC
CGCAAGACCT GGCTCACCGA ACCCGAACAC CTCACCAGTG ACTGGGCCAA CCAGCGCATC
AAGCCGATCG GCTGGCGCCG CAGCCACGAC TCGGACCCGG CGTCGCGCGA CGTGTTCCGT
TATCCGCGGC TCGGACCCGG CCAGCTGTGG GAGGCCGCCG CCGGCACCCT GGCCCACAAC
GGCGTCGTCC CCCGGCTGAA CTCGCCGGTT ACCAAGCTCG GCTTCGACGG CGCCACCTGG
ACCCTCGAGC TCGCCGACGG TGACACCGCC ACCGGCGACG CGGTGTTTTC CAGCATGCCG
CTGCGGTTGC TCGTCGACGC GCTGGAACCC GCGCCGCCCA AGCACATTCG CGCGGTGGCC
GCCGCCCTGC GGCACCGGTC GCTGATCACC GTCGCCGTCG GCGTCGACAC CCGCCGCGAC
ATCCCGTTCA ACTGGGTCTA CACCCCCGGC AAGGACTTCC ACTGCGGCCG GATCCAGAAC
TACCGCCGCT GGTCCAACGA CCTGGCCCCC CGCGACTTCG ACGGCGCCTT CCTCGGATTC
GAGTACTTCA TCGCCCCCAA CGGTGACCTG TGGAACGCCG ACGACGAACA CCTCACCGAG
CTGGTCACCC AGGATCTGCG CACCCTCGGC CTCGGCGGCG CGGCCGTCGC ACGCGTGATG
ATCGTCCGCT GCGAGTTCGC CTACCCCATC TACGACCCGG TGCGTGACCG CAGCGTCGTG
CGCATCCGCG ACTACCTGCG GCAGCAGTAC CCGTCGCTGT ATCCGATGGG CCGCAACGGC
ATGCACCACT ACGACAACCA GGACCACGCC ATGCTCAGCG CCATGCGCAG CGTCGGGCGG
GCCTTCGGCG AGAACGTCGA CCCGTGGCAG GTCAACACCG ACATCGGCTA CCACGAATAC
GGGCTGCTGC GAAAGTAG
|
|---|
| Protein sequence | MTSPRSPLII GAGPAGLTAA LELMNRGVTP RLYEASAEVG GLARTPTDGD WRIDPGGHRF
FTRNEDIMDL WKCLLPHDQW LVVGRRSAML VGGYYVRYPL LGRDLLTQMG YRRGLRGLSS
LAWSRLKRNF RLNDRDENFR QWGVGEFGRH WYEMFFDGYV RKTWLTEPEH LTSDWANQRI
KPIGWRRSHD SDPASRDVFR YPRLGPGQLW EAAAGTLAHN GVVPRLNSPV TKLGFDGATW
TLELADGDTA TGDAVFSSMP LRLLVDALEP APPKHIRAVA AALRHRSLIT VAVGVDTRRD
IPFNWVYTPG KDFHCGRIQN YRRWSNDLAP RDFDGAFLGF EYFIAPNGDL WNADDEHLTE
LVTQDLRTLG LGGAAVARVM IVRCEFAYPI YDPVRDRSVV RIRDYLRQQY PSLYPMGRNG
MHHYDNQDHA MLSAMRSVGR AFGENVDPWQ VNTDIGYHEY GLLRK
|
|---|
| |