Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1632 |
Symbol | |
ID | 4648674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 1732194 |
End bp | 1736738 |
Gene Length | 4545 bp |
Protein Length | 1514 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639805127 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_952467 |
Protein GI | 120402638 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0582362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.286828 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCACA TGCCCACCGA GACCGACCCG CTGGCGCGCT TCTCCGCGCT GACGCGCGAG TGGTTCACGG GCACGTTCGT GAAGCCGACC CCCGCGCAGG CGCAGGCCTG GAACGCCATC GCCGACGGGG ACAACACGCT GGTCATCGCG CCGACCGGGT CCGGTAAGAC GCTGGCGGCG TTCCTGTGGG CGATCGACGG CCTGGCCCGG GAGCCGGCGG CCCAGCGGGG CACCCGGGTG CTCTACGTCT CGCCGCTGAA AGCCCTGGCC GTCGACGTCG AACGCAACCT GCGCACCCCG CTGACCGGCA TCTCCCGCAT CGCCGAACGC ACCGGGCAGC AGCCCCCGGC CATCAGCGTC GGCGTGCGGT CCGGCGACAC CACGCCCAGC AAGCGCCGGG AACTGATCAC CAAGCCGCCC GACATCCTGA TCACCACCCC CGAGTCCCTG TTCCTGATGC TGACCTCGGC GGCGCGGGAA ACGCTGAGCC AGGTGCAGAC GGTGATAGTC GACGAGGTGC ACGCCGTCGC CGGCACCAAG CGCGGCGCGC ACCTGGCGGT GTCGCTTGAG CGGCTGGACG CGATGCTGCC GAAGCCGGCC CAGCGGATCG GGCTGTCGGC GACGGTCCGC CCGCCCGAGG AGGTGGCGCG GTTCCTGTCC GGCGCCGCTC CGACGACGAT CGTGGCACCG CCGGCGGCCA AGACGTTCGA CCTGACCGTG CAGGTGCCGG TGCCCGACAT GGCCAACCTG GAGAACAACT CGATCTGGCC GGAGGTCGAG CAGCGCATCG TCGACCTGGT CGAGGCGCAC AACTCGTCGA TAGTGTTCGC CAACTCGCGT CGCCTCGCCG AACGGTTGAC CGCACGGCTC AACGAGATTC ACGCCGAACG CCTGGGCGTC GAGCTGGGCG GGGCGAACCC GGGGGTGGCC GGCGGGGCTC CCGCGCACCT GATGGGCAGC GGGCAGACCT ACGGTGCGGA GCCGCTGCTG GCCCGCGCCC ATCACGGATC GGTCAGCAAG GAAGCCCGCG CCGACGTCGA GGAGGCCTTG AAAAGCGGAC GACTCAAGGC CGTGGTGGCG ACGTCCAGCC TGGAGCTCGG CATCGACATG GGTGCCGTCG ATCTGGTGAT CCAGGTGGAG ACTCCTCCGT CGGTGGCCAG CGGGCTGCAG CGGATCGGGC GGGCCGGCCA CCAGGTCGGC GAGATCAGCC AGGGGGTGCT GTTCCCGAAG CACCGCACCG ACCTGATCGG GTGCGCGGTC AGCGTGCAGC GGATGCTGGC CGGCCAGATC GAGACCATGC GGGTACCGGC CAACCCGCTG GACGTGCTGG CGCAGCACAC CGTGGCGGCC TGCGCCCTGG AGCCCATCAA TGCCGAGGCA TGGTTCGACA CCGTACGGCG CAGCGCCCCG TTCGCCACGC TGCCGCGCAG CGCGTTCGAG GCGACTTTGG ATCTGCTGTC GGGTAAGTAC CCGTCGACGG AGTTCGCCGA GCTGCGGCCG CGCATCGTCT ACGACCGCGA CACCGGCACG CTGACGTCAC GGCCCGGCGC GCAGCGGCTG GCCGTCACCT CCGGCGGCGC GATCCCCGAC CGCGGCCTGT TCACCGTGTT CCTGGCCTCC AGCGCGGATT CCGAGAAGCC CTCGCGGGTC GGGGAACTCG ACGAGGAGAT GGTCTACGAG TCCCGACCCG GTGACGTGAT CTCGCTCGGC GCGACGAGCT GGCGGATCAC CGAGATCACC CACGACCGGG TGCTGGTCAT CCCGGCGCCG GGCGAGCCGG CGCGGCTGCC GTTCTGGCGC GGCGACGGGG TCGGGCGGCC GGCGGAGCTG GGCGCAGCGA TCGGCGCGTT CACCGGCGAG CTGGCCCGGC TGGACCGTGA CGCGTTCGAA TCACGTTGCC AGGAAGTCGG TTTCGACGCC TTCGCGACGG ATAACCTGTG GCAGCTGATC TCCGAGCAGC GGGACGCGAC CTCGGCGGTG CCGTCGGACA CCACGCTGGT GGTGGAACGG TTCCGTGACG AGCTCGGTGA CTGGCGGGTC ATCCTGCATT CGCCCTACGG GCTGCGGGTG CACGGCCCGC TGGCGCTGGC GGTGGGCAAG CGGCTCTACG AGCGCTACGG CATCGACGAG AAGCCGACGG CCTCCGACGA CGGCATCATC GTGCGGCTGC CCGACACCGA CGACACCGCC CCGGGCGCCG ACATCTTCGT GTTCGACGCC GACGAGATCG AGCCGCTGGT GACCGCCGAG GTCAGCTCGT CGGCGCTGTT CGCCTCCCGG TTCCGGGAGT GCGCGGCCCG CGCGCTGCTG CTGCCGCGCC GACACCCCGG CAAGCGGTCC CCGCTGTGGC ATCAACGCCA GCGTGCCGCC CAACTCCTCG ACGTCGCCAA GGGCTATCCG GACTTCCCCA TCGTGCTGGA GGCGGTCCGC GAATGCCTGC AGGACGTCTA CGACGTGCCG ACGCTGACGG CGCTGATGGG CCGCATCGCG CAGCGCCGGG TGCGGCTGCT GGAGGTCGAG ACCCCGACGC CGTCGCCGTT CGCGGCCTCC CTGCTGTTCG GCTACGTCGG CGCGTTCATG TACGAGGGCG ACAGCCCGCT GGCCGAACGC CGCGCCGCCG CACTGTCATT GGATCCGACG CTGCTCGCCG AGCTGCTCGG GCGGGTGGAA CTGCGCGAGC TGCTCGACGC CGACGTGGTC ACCACCACCG CGCGGCAGCT GCAGCACCTG ACACCCGAGC GGCTGGCCCG CGACGCCGAA GGGGTGGCCG ATCTGCTGCG GCTGCTCGGC CCGCTGACCA CCGAGGAGAT CGCCGCGCGG TGTGTGGTTT CGGAGGTTGG CGGCTGGCTC GAAGGGCTAC TGGGCGCCAA ACGCGCGGTG CAGGTGTCGT TCGCCGGGCA GTCGTGGTGG GCCGCAGTGG AGGACATCGG CCGGCTGCGC GACGGGGTCG GCGTGGCGGT GCCCGTCGGC GTGCCGATGG CGTTCCTGGA GCAGGTCGTC GACCCGCTGG GCGAACTGCT GTCGCGGTAC GCCCGCACCA GGGGCCCGTT CACCACCGCC GAGGCGGCCG CCCGGTTCGG TCTGGGGCTG CGGGTGGCGG CCGACGTGCT GGGTCGGCTG GCCGTCGACG GCAAACTGGT CCGCGGCGAG TTCACCGATG CACCAACTGA TTCCGGTGGC CAATGGTGTG ATGCCGAGGT GCTGCGCATC CTGCGGCGCC GCTCCCTGGC TGCGTTGCGG GCGCAGATCG AGCCGGTCAG CACGGCAGCG TTCGGACGCT TCCTGCCGGC GTGGCAGATG CTCGGCGGCG ACGCGGTGTC GGGGGTCGAC GGGCTGGCCG CGGTGATCGA TCAGCTCGCC GGGGTGCCGA TGCCGGCGTC GGCGGTCGAA CCGTTGATCT TCGGGCAGCG GGTGCGCGAC TACCAGCCCG GCATGCTCGA CGAGCTGCTG GCTTCCGGCG AGGTGCTGTG GTCGGGCGTC GGTTCGCTGT CGACCGCCGA CGGCTGGGTG GCCTTCCACC TCGCCGAGAC CGCGCCGCTG TCGCTGGCCC CTTATGGTGA CCTGGGTCTG ACCGACATCC ACCACGCCGT GCTGGCGGCA CTCGCCGGCG GTGGCGCGTA CTTCTTCCGC CAGCTCACCG TCGACGGCGT CGGCACGGAG TCGCTGAAAG AGGCGTTGTG GCAGCTGATC TGGGCTGGAT ACGTCGGCGG TGACACGTTC GCCCCGGTGC GGGCGCTGCT GGCCGGGGCC CGCGGTTCGG GCCCCCGCAA GTCGGCAACG CCGTCGCACC GGCACCGTCG CGCGCCCCGG CTGAGCCGCT ACAGCCTGAG CACGTCGAGT CTCAGCGCGC ACCGCGATTC CGACCCCACC GTGGCGGGAC GGTGGTCGGC GCTTCCGGTC GCAGAGGTGG ACACCACGGT GCGGGCGCAC TACCAGGCCG ATCAGCTGCT GGCGCGGCAC GGCGTGCTGA CCAAGGGTGC GGTGGCCGGC GAGAACATCC CCGGCGGGTT CGCGTCGATG TACAAGGTGC TGACCACGAT GGAAGAGGCG GGGCGGTGTC AGCGCGGCTA TTTCGTCGAA TCCCTCGGCG GTGCGCAGTT CGCCACCGCG AGCACGGTGG ACCGGTTGCG CAGTCACGCC GACAGCATCG ACGACCAACA GCACACCCTG CGGGCGGTTG CGCTCGCCGC GACCGACCCG GCCAACCCGT ACGGCGCCGC GCTCCCGTGG CCGTCGCGCG GGGGCGAGGA TTCCGCGCAC CGGCCGGGGC GTAAGGCCGG TGCGCTGGTG GTGCTCGTCG ACGGTGCGCT GGCGTGGTTC GTCGAACGCG GCGGCCGGTC GCTGCTGAGC TTCACCGCCG ACGCCGAGAC GTGCCATGCC GCGGCCGCGT CGCTGGCGGA ACTGGTTTCG CGGCAACGGG TTCCGGGATT GCTGGTGGAG CGGATCGACG GGGCGCCGGT GCTGGAGGCC CGGGATTCGG CGGTGGCCGA GGCGCTGGTC CAGGCCGGGT TCGCGCGCAC GCCCCGCGGG TTGCGGCTGC GCTGA
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Protein sequence | MEHMPTETDP LARFSALTRE WFTGTFVKPT PAQAQAWNAI ADGDNTLVIA PTGSGKTLAA FLWAIDGLAR EPAAQRGTRV LYVSPLKALA VDVERNLRTP LTGISRIAER TGQQPPAISV GVRSGDTTPS KRRELITKPP DILITTPESL FLMLTSAARE TLSQVQTVIV DEVHAVAGTK RGAHLAVSLE RLDAMLPKPA QRIGLSATVR PPEEVARFLS GAAPTTIVAP PAAKTFDLTV QVPVPDMANL ENNSIWPEVE QRIVDLVEAH NSSIVFANSR RLAERLTARL NEIHAERLGV ELGGANPGVA GGAPAHLMGS GQTYGAEPLL ARAHHGSVSK EARADVEEAL KSGRLKAVVA TSSLELGIDM GAVDLVIQVE TPPSVASGLQ RIGRAGHQVG EISQGVLFPK HRTDLIGCAV SVQRMLAGQI ETMRVPANPL DVLAQHTVAA CALEPINAEA WFDTVRRSAP FATLPRSAFE ATLDLLSGKY PSTEFAELRP RIVYDRDTGT LTSRPGAQRL AVTSGGAIPD RGLFTVFLAS SADSEKPSRV GELDEEMVYE SRPGDVISLG ATSWRITEIT HDRVLVIPAP GEPARLPFWR GDGVGRPAEL GAAIGAFTGE LARLDRDAFE SRCQEVGFDA FATDNLWQLI SEQRDATSAV PSDTTLVVER FRDELGDWRV ILHSPYGLRV HGPLALAVGK RLYERYGIDE KPTASDDGII VRLPDTDDTA PGADIFVFDA DEIEPLVTAE VSSSALFASR FRECAARALL LPRRHPGKRS PLWHQRQRAA QLLDVAKGYP DFPIVLEAVR ECLQDVYDVP TLTALMGRIA QRRVRLLEVE TPTPSPFAAS LLFGYVGAFM YEGDSPLAER RAAALSLDPT LLAELLGRVE LRELLDADVV TTTARQLQHL TPERLARDAE GVADLLRLLG PLTTEEIAAR CVVSEVGGWL EGLLGAKRAV QVSFAGQSWW AAVEDIGRLR DGVGVAVPVG VPMAFLEQVV DPLGELLSRY ARTRGPFTTA EAAARFGLGL RVAADVLGRL AVDGKLVRGE FTDAPTDSGG QWCDAEVLRI LRRRSLAALR AQIEPVSTAA FGRFLPAWQM LGGDAVSGVD GLAAVIDQLA GVPMPASAVE PLIFGQRVRD YQPGMLDELL ASGEVLWSGV GSLSTADGWV AFHLAETAPL SLAPYGDLGL TDIHHAVLAA LAGGGAYFFR QLTVDGVGTE SLKEALWQLI WAGYVGGDTF APVRALLAGA RGSGPRKSAT PSHRHRRAPR LSRYSLSTSS LSAHRDSDPT VAGRWSALPV AEVDTTVRAH YQADQLLARH GVLTKGAVAG ENIPGGFASM YKVLTTMEEA GRCQRGYFVE SLGGAQFATA STVDRLRSHA DSIDDQQHTL RAVALAATDP ANPYGAALPW PSRGGEDSAH RPGRKAGALV VLVDGALAWF VERGGRSLLS FTADAETCHA AAASLAELVS RQRVPGLLVE RIDGAPVLEA RDSAVAEALV QAGFARTPRG LRLR
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