Gene Mvan_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1628 
Symbol 
ID4648670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1728644 
End bp1729777 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content63% 
IMG OID639805123 
Productfatty acid desaturase 
Protein accessionYP_952463 
Protein GI120402634 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.11671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG TCCTGGAAAC CCCGACCACC CCGACCCAAC AAACCACCCC GACGCAACAG 
ACCATCACCA AGACGGTCGC AGGCAAGACC GTCACCCTGA CCCCCGAGCA GGCCGAGGCG
TTCGGCCGGG AACTCGACGC GCTCAAAGAC AGCGTGATCG CCGACCTCGG CGAACGCGAT
GCCACCTACA TCCGGAAGAT GATCAAGGCG CAGCGCGGAC TTGAGATCGG TGGCCGGGCA
CTGCTCTTCG GTGGCATCTT CCCGCCGTTC TGGCTTGCGG GCACGGCGAT GCTCGGCCTG
AGCAAGATCA TCGACAACAT GGAGATCGGC CACAACGTCA TGCACGGCCA GTACGACTGG
ATGGGCGATC CGGCGATCTC CAGCAAGGGC TTCGAGTGGG ATACCGCGTG CCCGGCTGAC
CAGTGGCGGC ACTCGCACAA CTACATGCAC CACACGTACA CCAATATCGT CGGGCTGGAC
CGCGACATCG GTTACGGCAT CCTGCGCATG AGCTCCGACC AGAAGTGGCG GCCGTACTAC
CTGGGCAATC CGGTGTACGC GTTCCTGCTG ATGGTGCTGT TCCAATACGG CGTGGCGCTG
CACGAGATGG AAAGCGAGAA GATCGCCGCC GGTGAGATCA CGCTGACGGA CAAGCGCGAG
ATCCTCGAAG GGATCTGGCG CAAGACCAAG CGGCAGACGC TGAAGGACTA TGTGGCGTTC
CCGCTGCTGG CCGGGCCGTT CGCGCCGTGG GTGTTCGCGG GCAACATGAC CGCCAACCTG
ATGCGCAATG TGTGGGCGTA CATGATCATC TTCTGCGGGC ACTTCCCGGA AGACGTCCAA
GAGTTCTCCA TCGAGGAGAC CAAGGCCGAG ACGCGCGGGC AGTGGTACTT CCGTCAGGTG
CTGGGGTCGG CGAACCTGAC CGGTGGCAAG CTGTTCCACA TCTTGAGCGG CAACCTGAGC
TTCCAGATCG AGCACCACCT GTTCCCGGAC ATCCCGGCCT TCCGGCACGC CGAGATCGCG
CCGAAGGTTC AGGAGATCTG CGAGCGCTAC GGCGTGCCCT ACAACAAGGG CTCCCTGCCG
CACCAGTTCG GGACCGTGGT GCGCAAGATC ATCAAGTTCG CCCTGCCCTT CTAG
 
Protein sequence
MTEVLETPTT PTQQTTPTQQ TITKTVAGKT VTLTPEQAEA FGRELDALKD SVIADLGERD 
ATYIRKMIKA QRGLEIGGRA LLFGGIFPPF WLAGTAMLGL SKIIDNMEIG HNVMHGQYDW
MGDPAISSKG FEWDTACPAD QWRHSHNYMH HTYTNIVGLD RDIGYGILRM SSDQKWRPYY
LGNPVYAFLL MVLFQYGVAL HEMESEKIAA GEITLTDKRE ILEGIWRKTK RQTLKDYVAF
PLLAGPFAPW VFAGNMTANL MRNVWAYMII FCGHFPEDVQ EFSIEETKAE TRGQWYFRQV
LGSANLTGGK LFHILSGNLS FQIEHHLFPD IPAFRHAEIA PKVQEICERY GVPYNKGSLP
HQFGTVVRKI IKFALPF