Gene Mvan_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1626 
Symbol 
ID4646371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1726768 
End bp1727436 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content67% 
IMG OID639805121 
ProductTetR family transcriptional regulator 
Protein accessionYP_952461 
Protein GI120402632 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0432632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAGTC GTACGCCCAG CTCACGCTCG GGCCGCTCCC GATCGCGGGA GAAGGACACG 
CTGTCGCGAG AGGAACGCAA GGAGGCCACC CGCCGCGCGA TCGTCGCGGC GGCGCTGAGC
CTGCTCGCCG AACGCAGTTT CAGCGGGTTG AGCCTGCGCG AAGTCACCCG CGAGGCCGGC
ATCGTGCCGG CGGCGTTCTA CCGGCACTTC GAATCGATGG AAGCGCTCGG CCTCGTCCTG
ATCGACGAGT CGTTCCGCGC CCTGCGCGAG ATGCTGCGCG GCGCCCGGGC CGGAAAGCTG
GACCCGAACC GGGTGATCGA ATCCTCGGTC GACATCCTCA TCGACAGTGT CCAGCAGCGT
CGCGAGCACT GGCGCTTCAT CGGCCGGGAA CGCTCGACGG GCGTCACGGT GCTGCGGTAC
GCGATCCGCA CCGAAATCCG GCTCATCACT TCGGAACTGG CCATCGACCT GGCGCGCTTC
CCCAACCTGA ACACCTGGAG CAGCGAGGAC CTCAACATCC TGGCCAGCGT GTTCGTCAAC
TCGATGATCG TCATCGCCGA GTCATTGGAA GACGCCACCG ACCCCGCGAG CATCGCCGAG
ATCCGCCGGA TCGCGATCAA ACAACTGCGG ATGATCACCG TCGGCGTGGC GGGCTGGCGC
AGCAGTTAA
 
Protein sequence
MNSRTPSSRS GRSRSREKDT LSREERKEAT RRAIVAAALS LLAERSFSGL SLREVTREAG 
IVPAAFYRHF ESMEALGLVL IDESFRALRE MLRGARAGKL DPNRVIESSV DILIDSVQQR
REHWRFIGRE RSTGVTVLRY AIRTEIRLIT SELAIDLARF PNLNTWSSED LNILASVFVN
SMIVIAESLE DATDPASIAE IRRIAIKQLR MITVGVAGWR SS