Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1626 |
Symbol | |
ID | 4646371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 1726768 |
End bp | 1727436 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639805121 |
Product | TetR family transcriptional regulator |
Protein accession | YP_952461 |
Protein GI | 120402632 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0432632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACAGTC GTACGCCCAG CTCACGCTCG GGCCGCTCCC GATCGCGGGA GAAGGACACG CTGTCGCGAG AGGAACGCAA GGAGGCCACC CGCCGCGCGA TCGTCGCGGC GGCGCTGAGC CTGCTCGCCG AACGCAGTTT CAGCGGGTTG AGCCTGCGCG AAGTCACCCG CGAGGCCGGC ATCGTGCCGG CGGCGTTCTA CCGGCACTTC GAATCGATGG AAGCGCTCGG CCTCGTCCTG ATCGACGAGT CGTTCCGCGC CCTGCGCGAG ATGCTGCGCG GCGCCCGGGC CGGAAAGCTG GACCCGAACC GGGTGATCGA ATCCTCGGTC GACATCCTCA TCGACAGTGT CCAGCAGCGT CGCGAGCACT GGCGCTTCAT CGGCCGGGAA CGCTCGACGG GCGTCACGGT GCTGCGGTAC GCGATCCGCA CCGAAATCCG GCTCATCACT TCGGAACTGG CCATCGACCT GGCGCGCTTC CCCAACCTGA ACACCTGGAG CAGCGAGGAC CTCAACATCC TGGCCAGCGT GTTCGTCAAC TCGATGATCG TCATCGCCGA GTCATTGGAA GACGCCACCG ACCCCGCGAG CATCGCCGAG ATCCGCCGGA TCGCGATCAA ACAACTGCGG ATGATCACCG TCGGCGTGGC GGGCTGGCGC AGCAGTTAA
|
Protein sequence | MNSRTPSSRS GRSRSREKDT LSREERKEAT RRAIVAAALS LLAERSFSGL SLREVTREAG IVPAAFYRHF ESMEALGLVL IDESFRALRE MLRGARAGKL DPNRVIESSV DILIDSVQQR REHWRFIGRE RSTGVTVLRY AIRTEIRLIT SELAIDLARF PNLNTWSSED LNILASVFVN SMIVIAESLE DATDPASIAE IRRIAIKQLR MITVGVAGWR SS
|
| |