| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1621 |
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| Symbol | |
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| ID | 4646366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 1722561 |
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| End bp | 1723418 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639805116 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_952456 |
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| Protein GI | 120402627 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0153149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCGTC CCGCCCCGCT CCCGGTGCGG GACGGCCTGG GGCCGGCGCG GGTGCGGTTG
CGGGGCGGCG CGGTGCTCGT CGAGCTGGCC GACCGCTTCG GCGAGGCGGC CGCGGCCAAG
GTGCTCAATG GCGAGGTGTT CACCGCTGAC GGCGCGGTGG TGACGGCATC GACTGTGCTG
CAGCCCAATT CAGTGGTGTA TCTGTATCGC GACCTGCCGG ACGAGGTTGC GGTGCCGTTC
GACGTGCCGG TCCTGCACCG CGACGACAAT CTCGTCGTGG TCGACAAGCC GCACTTTCTG
GCCACCATGC CGCGCGGCAG CCACGTCGCG CAGACCGCCC TGGTGCGGAT GCGCCGCGAA
CTGGACCTGC CGCAGCTGAG CCCGGCGCAC CGCCTGGACC GGTTGACCGC CGGGGTCCTG
GTGTTCACCA CGCGCCGTGA GGTCCGTGGC GCCTATCAGA CGATGTTCGC CCGCGGCGGC
GTGAGCAAGA CCTACCTGGC GCAGTCGTCG GCGGGTACCG ACCGGGATTT CCCGATCACG
GTTCGCAGCC GAATCATCAA GCGGCGGGGT ACTTTACAGG CAGTCGAAGA GCCGGGGGAG
CCGAACGCGG AGACGCTCGT CGAGCGAGTC GACGACCGCA CCTACCGACT CATGCCGCGC
ACCGGGCGCA CCCACCAACT GCGCGTCCAC ATGAACTCAC TCGGCCTGCC CATCGCCGGA
GACCCCTTGT ACCCCAACGT CATCGACGTC GCCGTCGGCG ACTTCTCCAC GCCGCTGAAG
CTGCTGGCGC AGTGTCTGGA ATTCACTGAT CCGCTGGCGG GAGTCCGCCT GCGGTTCACC
AGCGAACGGA CGCTGTGA
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| Protein sequence | MRRPAPLPVR DGLGPARVRL RGGAVLVELA DRFGEAAAAK VLNGEVFTAD GAVVTASTVL
QPNSVVYLYR DLPDEVAVPF DVPVLHRDDN LVVVDKPHFL ATMPRGSHVA QTALVRMRRE
LDLPQLSPAH RLDRLTAGVL VFTTRREVRG AYQTMFARGG VSKTYLAQSS AGTDRDFPIT
VRSRIIKRRG TLQAVEEPGE PNAETLVERV DDRTYRLMPR TGRTHQLRVH MNSLGLPIAG
DPLYPNVIDV AVGDFSTPLK LLAQCLEFTD PLAGVRLRFT SERTL
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