| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1620 |
|---|
| Symbol | |
|---|
| ID | 4646365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 1720807 |
|---|
| End bp | 1722564 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639805115 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_952455 |
|---|
| Protein GI | 120402626 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0117086 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTCATG TGATCCCCGC TCCAGGCAAC GGCCAGACGT TCCTGGGCCC TGATCATCGA
GTCCGCGCCT GGCAGCGGCT AGGCAACGAG CAGTTCGACG TGATCGTCAT CGGCGGCGGC
GTCGTAGGTG CGGGCGCGGC GCTCGATGCC GCCACCCGCG GGCTGAAGGT GGCGCTGGTC
GAGGCCCGCG ATTTCGCCTC GGGGACGTCG AGCCGCAGCA GCAAGATGTT CCACGGCGGC
CTGCGTTATC TCGAGCAGCT GGAGTTCGGC CTGGTGCGCG AGGCCCTGCA CGAGCGTGAG
TTGTCGTTGA CGACGCTGGC GCCGCATCTG GTCAAGCCGT TGCCGTTTCT GTTCCCGCTC
ACCAACCGTG GCTGGGAACG GCCCTACATC GCGGCCGGGA TTTTCCTTTA CGACCAGCTC
GGCGGTGCGA AATCCGTTCC GGCGCAGAAA CATCTGACCC GATCCGGGGC GTTGCGGCTG
TCGCCGGGAC TCAAGCGCAG CTCGCTGATC GGCGGGATCC GCTACTACGA CACCGTCGTC
GACGACGCCC GCCACACGAT GACGGTGGCG CGTACCGCCG CCCATTACAG CGCGGTGGTG
CGGACCTCGA CGCAGGTGGT GGCGCTGCTG CGGGAAGGCG ACCGGGTCAC CGGGGTGAGG
GTGCGTGACT CCGAGAACGG GGAGGTCACC GAGGTGCGCG GCCATGTCGT GGTCAATGCC
ACCGGGGTGT GGACCGACGA GATCCAGGCA CTGTCGAAGC AGCGCGGCCG TTTTCGGGTG
CGCGCCTCCA AAGGGGTGCA CATCGTGGTG CCCCGCGACC GGATCGTCAG CGAGGTCGCG
ATCATCCTGC GCACCGAGAA GTCGGTGCTG TTCGTCATCC CGTGGGGAAC GCACTGGATC
ATCGGCACCA CCGACACCGA CTGGCACCTC GACCTCGCGC ATCCGGCCGC GACGAAGGCC
GACATCGACT ACATCCTGGG CCATGTCAAC AAGGTGCTGG CCACACCGCT GACCCACGAC
GACATCGACG GCGTGTACGC CGGCCTGCGG CCGCTGCTGG CCGGGGAGAG CGAAGAGACC
TCGAAGCTGT CGCGCGAGCA CGCCGTCGCG GTGCCCGCTC CGGGCCTGGT GGCGATCGCC
GGCGGCAAGT ACACCACCTA CCGGGTGATG GCCGAAGACG CCATCGACGC CGCTGCGGAG
TTCATCCCGA CGCGGGTGGC GCCGTCGATC ACCGAGCGGG TGCCGCTGAT GGGCGCCGAC
GGATACTTCG CGCTGATCAA CCAAACGCAA AGTGTCGGTG CGCATTACGG TCTGCACCCG
TACCGGGTGC GGCATCTTTT GGACCGGTAC GGGTCGCTGA TCGGCGAGGT GCTCAAGCTG
GCCAGCGATC TGGCCGCAGT CCGGCCCGAC CTCCTCGAGC CGATCACCGA CGCCCCGGTG
TACCTCAAAG TGGAAGCCGC CTACGCGGCG GCGGCCGAGG GTGCGCTGCA CCTGGAGGAC
ATCCTGGCGC GGCGGATGCG GATCTCCATC GAATACCCGC ACCGCGGCGT GGACTGTGCC
CGCGAAGTCG CCGAAGTCGT TGCACCCCTG CTGGGTTGGA GTGCCGAGGA CGTGGATCGC
GAGGTCGATA CATACCTGGC GCGGGTCGAG GCTGAGGTGT TGTCGCAGAC CCAGCCCGAC
GACGAGTCCG CGGACGCATT GCGGGCGGCC GCGCCGGAGG CGCGCGCCGA GATCCTCGAG
CCGGTGCCCC TCAAGTGA
|
|---|
| Protein sequence | MGHVIPAPGN GQTFLGPDHR VRAWQRLGNE QFDVIVIGGG VVGAGAALDA ATRGLKVALV
EARDFASGTS SRSSKMFHGG LRYLEQLEFG LVREALHERE LSLTTLAPHL VKPLPFLFPL
TNRGWERPYI AAGIFLYDQL GGAKSVPAQK HLTRSGALRL SPGLKRSSLI GGIRYYDTVV
DDARHTMTVA RTAAHYSAVV RTSTQVVALL REGDRVTGVR VRDSENGEVT EVRGHVVVNA
TGVWTDEIQA LSKQRGRFRV RASKGVHIVV PRDRIVSEVA IILRTEKSVL FVIPWGTHWI
IGTTDTDWHL DLAHPAATKA DIDYILGHVN KVLATPLTHD DIDGVYAGLR PLLAGESEET
SKLSREHAVA VPAPGLVAIA GGKYTTYRVM AEDAIDAAAE FIPTRVAPSI TERVPLMGAD
GYFALINQTQ SVGAHYGLHP YRVRHLLDRY GSLIGEVLKL ASDLAAVRPD LLEPITDAPV
YLKVEAAYAA AAEGALHLED ILARRMRISI EYPHRGVDCA REVAEVVAPL LGWSAEDVDR
EVDTYLARVE AEVLSQTQPD DESADALRAA APEARAEILE PVPLK
|
|---|
| |