Gene Mvan_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1617 
Symbol 
ID4646362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1717957 
End bp1718565 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content71% 
IMG OID639805112 
ProductTetR family transcriptional regulator 
Protein accessionYP_952452 
Protein GI120402623 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0133761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATCGC CCGGAACGTC TTCGATCGGC CGGCCGAGGA GCTTCGATAC CGACGAAGCT 
CTCGAGCGGG CCATGGTGGT GTTCTGGGCC CACGGCTACG AGGGTGCCTC GCTCACCGAC
CTGACCGAGG CCATGGGCAT CACCCGGACC AGCATGTACG CCGCGTTCGG CAACAAAGAG
GAGCTGTTCC GGGCCGCGCT GACGCGTTAC CTCGAGGGGC CGGGTGGCTA TCTCAGCCGG
GCGCTCGAGG AGTCGACGGC CCGCGAGGTG GCCGAGGCGT TCCTGCGCGG CAGTGTGCGG
GCCACCACCC GCCCCGAAGG CCCGGCAGGG TGCCTTGTCG TGCAGGGTTC ACTGGCCGCG
AGCGATGCCG GGCAACCCGT GCGCGATGCG CTGATCGCAT GCCGGGAAGA GGCGGTGTCA
CGTCTGCGCG AGCGTTTCCG CAGGGCGGTC AAGGACGGTG ACCTGCCGCC GGGAACCGAT
CCCGGTCTGC TCGCCCGCTA CCTCATGACC GTCGGCAACG GAATCGCGGT CCAGGCCGCC
AGCGGGGTCG CCCGCAGGGA ACTTCAGCGC GTGGCCGATG CGGCCCTGCG GCACTGGCCG
CCGGCCTGA
 
Protein sequence
MGSPGTSSIG RPRSFDTDEA LERAMVVFWA HGYEGASLTD LTEAMGITRT SMYAAFGNKE 
ELFRAALTRY LEGPGGYLSR ALEESTAREV AEAFLRGSVR ATTRPEGPAG CLVVQGSLAA
SDAGQPVRDA LIACREEAVS RLRERFRRAV KDGDLPPGTD PGLLARYLMT VGNGIAVQAA
SGVARRELQR VADAALRHWP PA