Gene Mvan_1611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1611 
Symbol 
ID4646356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1710159 
End bp1711340 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content73% 
IMG OID639805106 
Productamidohydrolase 
Protein accessionYP_952446 
Protein GI120402617 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.135045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTTG CCGCCGCGTC GACATGCGTC GAAGACGCTG TGCGCAGTCG CCGCGCCGAC 
CTGGTCGCGC TCTCGCACGC CATCCACGCC GAACCCGAAC TCGCGTTCGC CGAGCACCGC
AGCTGCGCCA AGACCCAGGC ATTGGTGGCC GAGCGCGGCT TCGAGATCAC CGCCGGGGTG
GCCGGCCTGG ACACTGCGTT CCGCGCTGTC TACGGCAGCG GGCCGCTGGT GGTCGGTGTC
TGCGCCGAGT ACGACGCGCT GCCCGAGATG GGGCACGCCT GCGGGCACAA CATCATCGCC
GCCTCGGCGG TGGGCACCGC GCTGGCGCTC GCCGAGGTGG CCGACGCGCT CGGCCTGACG
GTGGTGCTGC TCGGCACCCC CGCCGAGGAG CTGGGCGGTG GCAAGGCGCT GATGCTGCAG
GCCGGCGTGT TCGACGACAT CGCCGCGACG GTGATGCTGC ACCCGGGCCC GGTCGACATC
GCCGCGGCGC GGTCGCTGGC GCTCTCGGAG ATGACGATCC ACTACACCGG CCGGGAGTCG
CACGCCGCGG TCGCGCCGTT CCTCGGGGTG AACGCCGGCG ACGCCGTGAC CGTGGCGCAG
GTCGCCATCG GGCTGCTGCG TCAGCAGCTG GCGCCGGGTC AGATGGTGCA CGGCATCGTG
ACCGACGGCG GCCAGGCGTC CAACGTGATC CCGGGGCACA CCGAGATGCG CTACACGATG
CGCGCCAACG ACTCGGAATC GTTGCGCGCG TTGGAATCCC GAATGGCGGG CTGTTTCGCC
GCCGGCGCGG TGGCCACCGG TTGCGAGCAT GTCGTCTCCG ACACCGCACC GGCGTACGCC
GAGCTCGCGC CCGATCCGTG GCTGTCGGAG GTGTTCCGCG CCGAGATGAC GCGGGTGGGA
CGCACCCCGG TGGCCGCGGA GCTGGAGGCG TCGCTGCCGC TGGGCAGCAC CGACATGGGC
AACGTGACGC AGGTGATGCC CGGCATCCAC CCGATCGTCG GCATCGACGC CGGTGGCGCG
TCGATCCACC AGCCGGAGTT CGCCGCGGCG GCGGTCAGCG CCAGCGCCGA CACCGCGGTG
GTCGAGGGCG CGATCATGCT GGCCCGCACC GTGGTGGCGC TGGCCGAATC CGGCGTCGAA
CGCGACCGGG TGCTGGAGCA GTGGCAGAGG CGGGCGTCAT GA
 
Protein sequence
MPLAAASTCV EDAVRSRRAD LVALSHAIHA EPELAFAEHR SCAKTQALVA ERGFEITAGV 
AGLDTAFRAV YGSGPLVVGV CAEYDALPEM GHACGHNIIA ASAVGTALAL AEVADALGLT
VVLLGTPAEE LGGGKALMLQ AGVFDDIAAT VMLHPGPVDI AAARSLALSE MTIHYTGRES
HAAVAPFLGV NAGDAVTVAQ VAIGLLRQQL APGQMVHGIV TDGGQASNVI PGHTEMRYTM
RANDSESLRA LESRMAGCFA AGAVATGCEH VVSDTAPAYA ELAPDPWLSE VFRAEMTRVG
RTPVAAELEA SLPLGSTDMG NVTQVMPGIH PIVGIDAGGA SIHQPEFAAA AVSASADTAV
VEGAIMLART VVALAESGVE RDRVLEQWQR RAS