| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1587 |
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| Symbol | sdhA |
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| ID | 4648628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 1680436 |
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| End bp | 1682190 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639805082 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_952422 |
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| Protein GI | 120402593 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.243588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.596865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTTG AACACCGCTA CGACGTCGTG ATCGTCGGCG CAGGTGGCGC CGGAATGCGC
GCGGCCGTGG AGGCAGGACC GCGGGCACGG ACCGCGGTGC TGACCAAGCT CTACCCGACG
CGCTCGCACA CCGGCGCCGC ACAGGGCGGC ATGTGCGCCG CGCTGGCCAA CGTCGAGGAA
GACAACTGGG AGTGGCACAC CTTCGACACC GTCAAGGGCG GTGACTACCT GGCCGACCAG
GACGCCGTCG AGATCATGGC CAAGGAGGCC ATCGACGCGG TGCTCGACCT GGAGAAGATG
GGGATGCCGT TCAACCGCAC CCCCGAGGGC CGTATCGACC AGCGCCGCTT CGGCGGGCAC
ACCCGCGACC ACGGCAAGGC CCCGGTGCGC CGGGCCTGCT ACGCCGCCGA CCGCACCGGA
CACATGATCC TGCAGACGCT GTACCAAAAC TGCGTCAAGC ACGACGTCGA GTTCTTCAAC
GAGTTCTACG CCCTCGACAT CACGCTGACC GAGACGGCGT CGGGTCCGGT GGCCACCGGC
GTCGTCGCGT ACGAGTTGGC GACGGGCGAC ATCCACATCT TCCACGCCAA GGCGATCGTG
TTCGCCACCG GCGGGTCGGG CCGGATGTAC AAGACCACGT CGAATGCGCA CACGCTGACC
GGCGACGGGC TGGGCATCAT CTTCCGCAAG GGACTTCCCT TGGAGGACAT GGAGTTCCAC
CAGTTCCACC CGACGGGCCT GGCCGGCCTG GGCATCCTGA TCTCCGAGGC CGTGCGCGGC
GAGGGCGGCC GGTTGCTCAA CGGCGAGGGC GAGCGCTTCA TGGAACGCTA CGCACCGACC
ATCGTCGACC TGGCGCCGCG CGACATCGTC GCCCGCTCAA TGGTTCTCGA GGTGCTCGAA
GGTCGCGGCG CCGGCCCGAA CAAGGACTAC GTCTACATCG ACGTGCGCCA CCTCGGCGAG
GACGTGCTGG AAGCCAAGCT GCCCGACATC ACCGAGTTCG CCCGCACCTA CCTGGGCGTG
GACCCGGTCA AGGAACTCGT GCCCGTCTAC CCGACGTGCC ACTACGTGAT GGGCGGCATC
CCGACCACCG TCAACGGCCA GGTGCTCGCG GACAACACCA CGATCATCCC CGGCCTGTAC
GCCGCCGGAG AGTGCGCATG CGTGTCGGTG CACGGCGCCA ACCGGCTGGG CACCAACTCG
CTGCTGGACA TCAACGTGTT CGGCCGCCGC GCGGGCATCG CCGCCGCGAA TTACGCACTG
GGACATGACT TCGTGGACCT GCCGGAGAAC CCCGCCGAGA TGGTGGTCGG CTGGGTCGGC
GACATCCTCT CCGAGCACGG CAACGAGCGC GTCGCCGACA TCCGCGGAGC GCTGCAGCAG
TCGATGGACA ACAACGCCGC GGTGTTCCGC ACCGAGGAGA CGCTCAAGCA GGCGCTCACC
GACATCCATG CGCTCAAGGA GCGGTACTCG CGAATCACGG TGCAGGACAA GGGCAAGCGC
TACAACAGCG ACCTGCTGGA AGCCATCGAG CTGGGCTTCC TGCTGGAGCT CGCCGAGGTC
ACCGTGGTGG GCGCGTTGAA CCGCAAGGAA TCCCGCGGCG GGCATGCCCG TGAGGACTAC
CCCAACCGCG ACGACACCAA CTACATGCGT CACACCATGG CGTACAAGGA GGGCACCGAC
CTGCTCTCCG ACATCCGGTT GGACTACAAG CCCGTCGTCC AGACGCGGTA CGAGCCGATG
GAACGGAAGT ACTGA
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| Protein sequence | MIVEHRYDVV IVGAGGAGMR AAVEAGPRAR TAVLTKLYPT RSHTGAAQGG MCAALANVEE
DNWEWHTFDT VKGGDYLADQ DAVEIMAKEA IDAVLDLEKM GMPFNRTPEG RIDQRRFGGH
TRDHGKAPVR RACYAADRTG HMILQTLYQN CVKHDVEFFN EFYALDITLT ETASGPVATG
VVAYELATGD IHIFHAKAIV FATGGSGRMY KTTSNAHTLT GDGLGIIFRK GLPLEDMEFH
QFHPTGLAGL GILISEAVRG EGGRLLNGEG ERFMERYAPT IVDLAPRDIV ARSMVLEVLE
GRGAGPNKDY VYIDVRHLGE DVLEAKLPDI TEFARTYLGV DPVKELVPVY PTCHYVMGGI
PTTVNGQVLA DNTTIIPGLY AAGECACVSV HGANRLGTNS LLDINVFGRR AGIAAANYAL
GHDFVDLPEN PAEMVVGWVG DILSEHGNER VADIRGALQQ SMDNNAAVFR TEETLKQALT
DIHALKERYS RITVQDKGKR YNSDLLEAIE LGFLLELAEV TVVGALNRKE SRGGHAREDY
PNRDDTNYMR HTMAYKEGTD LLSDIRLDYK PVVQTRYEPM ERKY
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