Gene Mvan_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1580 
Symbol 
ID4648621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1673675 
End bp1675120 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content72% 
IMG OID639805076 
Productamine oxidase 
Protein accessionYP_952416 
Protein GI120402587 
COG category[S] Function unknown 
COG ID[COG3349] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.128087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0872032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGTCG TCGGTGGCGG CATCGCGGGG CTGGCCGCGG CCACCGGGCT GGCCGAACGC 
GGGGTCGCCG TCGAGGTGAT CGAGAAGCAC GGCTACCTCG GTGGCCGGGT CGGCGGCTGG
TCGGACACCC TGGCCGACGG CACCCCGGTG GCAATGAACC GCGGCTTCCA CGCGTTCTTC
CGCCAGTACT ACAACCTGCG GGCCCTGCTG CGGCGCAGCG ACCCCGGGCT GTCGGCGCTC
ACCCCGGTCG AGGACTACCC GCTGATCGAC GGCGCCGGGC GCCGCGACAC CTTCCGCGGT
CTGCCGCAGA CGCCGCCGCT GAACGCGCTG GCATTCGCGT TGCGCAGCCC CACCTTCCGG
CTGCGGGACC TCGTCCGGCT CGACGCCAAG GCCGCCGCAC CGCTGGCCGC GGTGTCGGTG
CCCGAGACCT ACGACCTGCT CGACGGCCGC GACGCCGAAA CCTTCCTGCG CGACATCAAC
TTTCCCGAGG CTGCCCGGCA TCTGGCCTTC GAGGTGTTCG CGCGCAGCTT CTTCGCGCGT
CCGGAGACGC TGTCGGCCGG TGAGCTGGTC ACCATGTTCC ACATCTACTT CCTGGGCTCC
AGCGAAGGGT TGATCTTCGA CGTTGCGAAC GCCAACTTCG ATGTGGCCCT GTGGAATCCG
CTGCGACGTT ATCTGGAAGG ACGCGGTGTG GTGTTCCACA CCGGCGCCGA GGTCGATTCG
GTCACGGTCG CCGACGAGGT GACGGTCACC GGTTCGCGCG CTCAGGTGTG GTCGGCCGAC
GCCGCGGTGC TGGCCACCGA CCCCGGTTCG CTGCGGCGTG TGGTCGCGGC ATCGCCGGGT
CTGGGAGATC CGTCGTGGCG CGAGCGGGTC GCGGCGATCG GCACCGCGCC GCCGTTCGTC
GTGCTGCGGC TGTGGCTGGA CCGGCCGGTG CGACACGATC GCGCCGCGTT CGTCGGCACC
GGGGGGCGGG ATCCGCTGGA CAACATCAGC GTCCTGGAGC GCTACGAGCG CGAGGCCGCC
CAATGGTGCT CCCGCACAGG CGGTTCGGTG GTGGAACTGC ACGCCTACTC GGTCCGTGAC
GAGGACGCCG ACGTGCGCGA CAGGCTGATC GCGCGGATGC ACGAGCTGTA TCCCGAGACC
GCGACGGCAT CGATCGTGGC CGAACGGCTG CTGCGCCGCG ACGACTGTCC CCGGTTCGCC
CCGGGCGATT TCGCCGACCG GCCCACCGTG TCCACCCCGG ATCCGCGGCT GAAGCTCGCC
GGCGACGGCA TCCGCATCGA CCTGCCGGTG GCTCTGATGG AACGCGCAGC CACCACCGGC
TGGACCGCGG CCAACGAGCT GCTCACCGGC TTCGGGCTGG CCGGCCACAC GTTGCACACC
GTCCCCAACC GCGGCCGGTC GGCGGTGTTG CGTCGGCTGG CCACCTCGGC CGGGGGTGTC
CGGTGA
 
Protein sequence
MVVVGGGIAG LAAATGLAER GVAVEVIEKH GYLGGRVGGW SDTLADGTPV AMNRGFHAFF 
RQYYNLRALL RRSDPGLSAL TPVEDYPLID GAGRRDTFRG LPQTPPLNAL AFALRSPTFR
LRDLVRLDAK AAAPLAAVSV PETYDLLDGR DAETFLRDIN FPEAARHLAF EVFARSFFAR
PETLSAGELV TMFHIYFLGS SEGLIFDVAN ANFDVALWNP LRRYLEGRGV VFHTGAEVDS
VTVADEVTVT GSRAQVWSAD AAVLATDPGS LRRVVAASPG LGDPSWRERV AAIGTAPPFV
VLRLWLDRPV RHDRAAFVGT GGRDPLDNIS VLERYEREAA QWCSRTGGSV VELHAYSVRD
EDADVRDRLI ARMHELYPET ATASIVAERL LRRDDCPRFA PGDFADRPTV STPDPRLKLA
GDGIRIDLPV ALMERAATTG WTAANELLTG FGLAGHTLHT VPNRGRSAVL RRLATSAGGV
R