| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1578 |
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| Symbol | |
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| ID | 4648619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 1671086 |
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| End bp | 1672600 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639805074 |
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| Product | phytoene dehydrogenase-related protein |
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| Protein accession | YP_952414 |
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| Protein GI | 120402585 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0475016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACGC TGGGCGGAAA AACCGACCGC GTCGTCGTGG TCGGCGCGGG CCTGTCCGGA
TTGTCGGCGG CGCTGCAGCT GGCCGGCCGG GGCCGCCAGG TCACCGTGCT GGAACGGGGT
GATCATCCCG GCGGACGGGT CGGTCGCGCC GACGTCAACG GCTACCGGCT CGACACCGGG
CCGACCGTGC TGACCATGCC GGACATCATC GACGACGCGT TCGCCGCGGT CGGCGAGTCC
CTGGCGGACC GCCTGCCGAT GGACCCGGTA CACCCGGCCT ACCACGCGAA GTTCGCCGAC
GGCAGCGCGC TGGCGGTGCA CACCGAGGCC GACGCGATGG TGTCCGAGAT CAAACGGTTC
GCCGGCCGCC GGGAGGCCGA CGGCTATCTG CGGCTGCGGG AGTGGCTGAC CAAGCTGTAC
CGCACCGAGT TCGACGGGTT CATCGCGAAC AACTTCGACT CGCCGCTGTC GCTGCTGACA
CCGTCGCTGG CGCGTCTGGT CGCACTCGGC GGCTTCCGCC GCTGGGAACC GGCGGTGCGC
CGCTTCCTGA AAGACGAGCG GCTGCTGCGG GTGTTCACGT TCCAGTCGCT CTACGCCGGA
GTGCCGCCGC AGAGCGCGCT GGCCGTGTAC GCGGTGATCG CCTACATGGA CACCGTCGCG
GGGGTGTACT TCCCGCGCGG CGGCATGCGC GCGCTACCCG ATGCGATGGC CGCCGCCGCC
TCCCGGGCCG GTGTCGAATT TGTTTACAAT GCAACGGTTT CCGATCTCGA GTTCATCGGA
TCCCGGGTCA CGGCGGTGCG CACCGTGGAC GGCGGCCGGG TGCGGGCGGA CTCGGTGGTG
CTGACCACCG AGCTGCCCGA CACGTACCGG CTGATCGGCC GCACACCGGT GCGGCCGCTG
CGGCTGCGTC CTGCGCCGTC GGCGGTGGTC GCGCACGTCG GGTGCCGGGC GGTCGGCCCC
GACGCCGATG ACGCCGGTCA CCACACGATC CTGTTCGGTG ACGCGTGGAC GCAGACGTTC
CGCGACATCA TCGACGACGG CCGGGTGATG GGTGACCCGT CGCTGCTGGT GACCCGGCCG
ACGGCGACTG ACCCGACGCT GGCGCCGGCC GGGCGTGACC TGCTCTACGT GCTGGCTCCG
GCGCCCAACA CCGACGTCGG CACCCTGGAT TGGGATGCCG CCGGTTCGGG GTATGTGGAG
CAGATGTTGT CCGCGGTGCG CAGCCGGATG CCCGGGGTGG CCGAGGACGC CGAGCTGTTG
CACGTCGTGA CACCGGCCGA CTGGCGGCGC CAGGGGATGG CGTCGGGCAC GCCGTTCGCG
TTGGCGCACA CCTTCGCCCA GACCGGGCCG TTCCGGCCGG CCAACACCGT GCGCGGCATC
GACAACGTGG TGCTGGCCGG TTCGTCCACG GTCCCCGGGG TCGGCGTTCC GACCGCGATC
CTGTCCGGTC GGCTGGCCGC CGACCGGATC ACCGGCATCC CTGTCCGTCC TCGTCCCTCG
GAGGTCCACC GCTGA
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| Protein sequence | MRTLGGKTDR VVVVGAGLSG LSAALQLAGR GRQVTVLERG DHPGGRVGRA DVNGYRLDTG
PTVLTMPDII DDAFAAVGES LADRLPMDPV HPAYHAKFAD GSALAVHTEA DAMVSEIKRF
AGRREADGYL RLREWLTKLY RTEFDGFIAN NFDSPLSLLT PSLARLVALG GFRRWEPAVR
RFLKDERLLR VFTFQSLYAG VPPQSALAVY AVIAYMDTVA GVYFPRGGMR ALPDAMAAAA
SRAGVEFVYN ATVSDLEFIG SRVTAVRTVD GGRVRADSVV LTTELPDTYR LIGRTPVRPL
RLRPAPSAVV AHVGCRAVGP DADDAGHHTI LFGDAWTQTF RDIIDDGRVM GDPSLLVTRP
TATDPTLAPA GRDLLYVLAP APNTDVGTLD WDAAGSGYVE QMLSAVRSRM PGVAEDAELL
HVVTPADWRR QGMASGTPFA LAHTFAQTGP FRPANTVRGI DNVVLAGSST VPGVGVPTAI
LSGRLAADRI TGIPVRPRPS EVHR
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