| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1564 |
|---|
| Symbol | |
|---|
| ID | 4647703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 1653034 |
|---|
| End bp | 1654734 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639805060 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_952400 |
|---|
| Protein GI | 120402571 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.716975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCA ACACAGATCT CTTCGATACC CTGCGCAGCG CCCGCGACCA CCTGGTCGAC
CTGATGGCCG ACTACGACAA GGCCGTGGAG ACCTTCCAGT GGCCGCGGAT CACCGGGACG
TTCAACTGGG CCACCGACTG GTTCGACGCG GTCGCCCGCG ACAACGACGG CGTCGCGCTG
TGGATCGTCG AGCAGGACGG CACCGAACTG AAGGTGACAT TCGACCAGAT GGCCCGCCGG
TCCGACCAGG TGGCGTCCTG GCTGCGCGGA CTCGGGGTGG GCAAGGGCGA CCGGGTCATC
CTGATGCTGG GCAACCAGGT CGAACTGTGG GAGTCCATGC TCGCGGTCGC CAAGCTGGGC
GCGGTCATCA TGCCGACCAC CGGGGCGCTG GGCTCCGAGG ACCTGGCCGA CCGGATCGGC
CGGGGCCGCG CCGGCTTCGT CATCGCCAAC GCCGCCGACG CGGCCAAGTT CGCCGACGTG
CCCGGCGACT ACGTGCGGAT CGCCGTCGGC GACCCGGTGC CGGGCTGGCA CCCCTACTCC
GACACCGCAG CCGCCGCGGC CGAACCCCAC GACCCCCAGA CCTCGGCCGA CGACCCGCTG
CTGGTGTATT TCACCTCCGG CACCACCAGC AAGCCCAAGC TGGTCGAGCA CTCCCAGATC
AGCTATCCGG TGGGACACCT GACGACGATG GCGTGGATCG GGGTGCGACC CGGCGACATC
CACCTGGCCA TCAGCTCGCC GGGGTGGGCC AAGCACGCGT GGAGTTGCTT CTTCGCGCCG
TGGCTCGCCG AGGCCACGAT CTTCGTCTAC AACTACGGCC GGTTCGACGC CGCGGCGCTG
CTGCAGCAGA TGCGCCGGGC CGGGGTCAGC ACGTTCTGCG CGCCCCCGAC GGTGTGGCGG
ATGCTGATCC AGTCCGACCT CGGCGAGCGC CCACCCGGTC TGCGCGAGGT GCTGGGCGCG
GGAGAACCGC TCAACCCCGA GGTGATCGGC GCGGTGGAAC GCGCGTGGGG CCTCACCATC
CGGGACGGGT TCGGCCAGAC CGAGACCACC CTGCAGGTCG GCAACACGCC GGGCCAGCCG
GTCAAGGCGG GTTCGATGGG CCGGCCGATG CCGGGAGTGC CTGTGGTACT GGTGAACCCG
CTGACCGGTG AGCTCGCCGA CGAAGGCGAG ATCTGCCTGG ACCTGAGCCG GACACCGCTG
AACCTGATGA CCGGCTACCT CGGCGACGAC GCCCGCAACG CGCTGGTGAT GCGTGACGGC
TACTACCACA CCGGCGACGT CGCCAGCCGC GACGCCGACG GCTACATCAC CTATATCGGC
CGCACCGACG ACGTGTTCAA GTCCTCGGAC TACAAGGTGT CGCCGTTCGA GCTGGAGAGC
GTGCTCATCG AGCATCCGGC GGTGGTCGAG GCCGCGGTGG TGCCACAGCC CGACGACACC
AGGCTGGCCG TGCCCAAGGC CTATATCAGC CTCGCCGAGG GATGGGCCGC CGACGCCGAC
ACGGCCCGAT CCATCCTGGA ACACTCCCGA GACCACCTCG CGCCGTACCT GAAGGTGCGC
CGGCTGGAGT TCTACGAGTT GCCGAAGACG ATCTCGGGCA AGATCCGCCG GGTGGAGCTG
CGCCGCCGGG AGGAAGACGC CCACACCGCG GGGCAACCCA TCGACACCGA GTACCGCTAC
GAGGACCTGG TGCAGCGATG A
|
|---|
| Protein sequence | MASNTDLFDT LRSARDHLVD LMADYDKAVE TFQWPRITGT FNWATDWFDA VARDNDGVAL
WIVEQDGTEL KVTFDQMARR SDQVASWLRG LGVGKGDRVI LMLGNQVELW ESMLAVAKLG
AVIMPTTGAL GSEDLADRIG RGRAGFVIAN AADAAKFADV PGDYVRIAVG DPVPGWHPYS
DTAAAAAEPH DPQTSADDPL LVYFTSGTTS KPKLVEHSQI SYPVGHLTTM AWIGVRPGDI
HLAISSPGWA KHAWSCFFAP WLAEATIFVY NYGRFDAAAL LQQMRRAGVS TFCAPPTVWR
MLIQSDLGER PPGLREVLGA GEPLNPEVIG AVERAWGLTI RDGFGQTETT LQVGNTPGQP
VKAGSMGRPM PGVPVVLVNP LTGELADEGE ICLDLSRTPL NLMTGYLGDD ARNALVMRDG
YYHTGDVASR DADGYITYIG RTDDVFKSSD YKVSPFELES VLIEHPAVVE AAVVPQPDDT
RLAVPKAYIS LAEGWAADAD TARSILEHSR DHLAPYLKVR RLEFYELPKT ISGKIRRVEL
RRREEDAHTA GQPIDTEYRY EDLVQR
|
|---|
| |