| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1563 |
|---|
| Symbol | |
|---|
| ID | 4647702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 1651421 |
|---|
| End bp | 1653037 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639805059 |
|---|
| Product | AMP-binding domain protein |
|---|
| Protein accession | YP_952399 |
|---|
| Protein GI | 120402570 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.716975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGT CCTACGACGC AGGCCCGACG GACACCGCGA TCCTGGAAGA GACGATCGGC
GCGAACTTCG AACGGATCGC CGCGACCTAT CCCGACCACG AAGCACTCGT CGACGTCACC
GGCGGCCGGC GCTGGACCTA CGCCGAGCTC GATCGCGAAA TCGACACGGT GGCAAAGGGT
TTGATGTCGC TGGGCACCGA GAGCGGGGAC CGCGTCGGCA TCTGGGCGCC GAACTGCCCC
GAGTGGACGA TCGTGCAGTA CGCCACGGCG AAGATCGGCG CGATCCTGGT CAACATCAAC
CCCGCCTACC GGACCCACGA GCTGAGCTAC GTGCTCGAGC AGTCCGGCGT CTCCACGTTG
ATCTCGGCGA CGCGGTTCAA GACCTCCGAC TACGTCGCGA TGGTCGACGA GGTGCGACCG
GATGTCCCTG CGCTGCAACG TGTCCTGTTC ATCGGCACCG ACGACTGGGA CAGGTTGCGT
TCGCGCGCCG ACGTGATCGA CGATGCGCTG CTGCGCGAGC GGTCCGCGAG CCTGTCCCAC
CACGACCCGG TGAACATCCA GTACACCTCG GGCACCACCG GCTTCCCGAA GGGCGCGACG
CTGTCGCACC GCAACATCCT CAACAACGGC TTCTTCGTCA CCGAACAGAT CCGGCTGGGA
CCCGGCGACC GGCTGTGCAT CCCGGTCCCC TTCTACCACT GCTTCGGCAT GGTGATGGGC
AATCTGGGCT GCACCACCCA CGGCGCCACG ATGGTGATCC CGGCGCCCGG CTTCGACCCG
GGCCAGACCC TGAAGACCAT CGAAACCGAA AGGTGCACCG CGGTTTACGG GGTGCCGACG
ATGTTCATCG CGATGCAGAA CCACGCCGAC TTCGCCGAGC GGGACCTGTC GTCACTGCGG
ACCGGCATCA TGGCCGGCGC GGTGTGCCCG GTCGAGGTGA TGAAGCGCTG CGTCGAAGAG
ATGAACATGT CGGAGATCTC GATCGCCTAC GGCATGACCG AGACGTCACC GGTGTCGTGC
CAAACGCTCA TCGACGACGA TCTGGAACGC CGGACGTCCT CGATCGGCCG GGTGCACCCG
CACGTCGAGA TCAAGATCGT CGACCCGGAC ACCGGCCACG TCGTCGAGCG CGGCACCCCC
GGGGAGTTCT GCACCCGCGG CTACTCGGTG ATGCTCGGGT ACTGGAGAGA CGAGGAGAAG
ACGGCCCAGG CCGTCGACGC CGACGGCTGG ATGCACACCG GCGACCTGGC CGTGATGCGT
CCGGACGGGT ACTGCAACAT CGTCGGGCGG ATCAAGGACG TCGTGATCCG CGGCGGCGAG
AACATCTACC CGCGCGAGGT CGAGGAGTTC CTCTACACCC ATCCCGACAT CGAGGACGCC
CAGGTGGTCG GCGTGCCCGA CGCCCGGTAC GGCGAGGAGA TCTGCGCCTG GATCCGGATG
CGGCCCGGGC GCAGAGCGCT CGACGCCGCA GCGGTGCGGG AGTTCGCGGC AGGCAAACTC
GCCCACTACA AGATCCCGCG CTACGTCCAC GTCGTCGACG AGTTCCCCAT GACGGTGACC
GGCAAGATCC GCAAGGTCGA GATGCGCGAG GTCAGCGCCG GACTGTTCGC GGATTGA
|
|---|
| Protein sequence | MSQSYDAGPT DTAILEETIG ANFERIAATY PDHEALVDVT GGRRWTYAEL DREIDTVAKG
LMSLGTESGD RVGIWAPNCP EWTIVQYATA KIGAILVNIN PAYRTHELSY VLEQSGVSTL
ISATRFKTSD YVAMVDEVRP DVPALQRVLF IGTDDWDRLR SRADVIDDAL LRERSASLSH
HDPVNIQYTS GTTGFPKGAT LSHRNILNNG FFVTEQIRLG PGDRLCIPVP FYHCFGMVMG
NLGCTTHGAT MVIPAPGFDP GQTLKTIETE RCTAVYGVPT MFIAMQNHAD FAERDLSSLR
TGIMAGAVCP VEVMKRCVEE MNMSEISIAY GMTETSPVSC QTLIDDDLER RTSSIGRVHP
HVEIKIVDPD TGHVVERGTP GEFCTRGYSV MLGYWRDEEK TAQAVDADGW MHTGDLAVMR
PDGYCNIVGR IKDVVIRGGE NIYPREVEEF LYTHPDIEDA QVVGVPDARY GEEICAWIRM
RPGRRALDAA AVREFAAGKL AHYKIPRYVH VVDEFPMTVT GKIRKVEMRE VSAGLFAD
|
|---|
| |