Gene Mvan_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1560 
Symbol 
ID4647699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1647710 
End bp1648735 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content68% 
IMG OID639805056 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_952396 
Protein GI120402567 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.206839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA CCATGAGCAA CACACCCAGG CCCGTCGTCT TCTCGGGCGC GCAACCCACG 
TCTGACTCCC TGCATCTCGG CAACGCGCTG GGGGCGGTGG CGCAGTGGGT CGGCCTGCAG
GAGGGCAACG ACGCGTACTT CTGCGTCGTC GACCTGCATG CCATCACGGT GTCCCAGGAC
CCCGAGACGC TGCGTAAACG CACGCTGGCC ACGGCCGCGC AGTACCTCGC GCTCGGTGTG
GATCCTGACC GGGCGACGGT GTTCGTGCAG AGCCATGTCC CTGCCCACGC CGAATTGGCT
TGGGTGCTGG GCTGTTTCAC CGGCTTCGGG CAGGCGTCGC GGATGACGCA GTTCAAGGAC
AAGTCGCAGA AGCAGGGTGC CGACTCCACC ACGGTCGGGT TGTTCACCTA TCCGGTGCTG
ATGGCCGCCG ACGTGCTGCT CTACGACACC GGGCTGGTCC CGGTCGGCGA GGATCAACGC
CAGCACCTCG AGCTCGCGCG CGACCTCGCC CAGCGGATCA ACGCCCGGTT CCCGGGCACG
TTCGTGGTGC CCGAGGCGAT GATCCCGAAG GCCACCGCGA AGATCTACGA CCTGCAGGAT
CCGACGGCGA AGATGAGCAA GTCGGCTGAC AGTGACGCCG GGCTGATCAG CCTGCTCGAC
GATCCGGCCA AGACGGCCAA GAAGATCCGC TCGGCGGTCA CCGACAGCGA GCGGGAGATC
CGCTTCGACC GGGACGCCAA GCCGGGGGTG TCCAACCTGC TGACCATCCA GTCGGCGGTC
ACCGGCGTCG ACGTCGACAA GCTCGTCGAG GGCTACGCGG GCCGCGGATA CGGGGACCTG
AAGAAGGAGA CCGCCGAGGC GGTCGTCGAG TTCGTCACCC CGATCAAGGC CCGCGTCGAC
GAGTTGCTCG GCGACCCCGC GGAGCTCGAA GGCGTGCTGG CCAGGGGCGC GCAGCGGGCC
CGGGAAGTGT CTGGAGTGAC GTTGCGCCGG GTATACGACC GGCTAGGGTT CCTAGCGTCC
CGTTGA
 
Protein sequence
MNTTMSNTPR PVVFSGAQPT SDSLHLGNAL GAVAQWVGLQ EGNDAYFCVV DLHAITVSQD 
PETLRKRTLA TAAQYLALGV DPDRATVFVQ SHVPAHAELA WVLGCFTGFG QASRMTQFKD
KSQKQGADST TVGLFTYPVL MAADVLLYDT GLVPVGEDQR QHLELARDLA QRINARFPGT
FVVPEAMIPK ATAKIYDLQD PTAKMSKSAD SDAGLISLLD DPAKTAKKIR SAVTDSEREI
RFDRDAKPGV SNLLTIQSAV TGVDVDKLVE GYAGRGYGDL KKETAEAVVE FVTPIKARVD
ELLGDPAELE GVLARGAQRA REVSGVTLRR VYDRLGFLAS R