| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1530 |
|---|
| Symbol | dnaE2 |
|---|
| ID | 4648263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 1618327 |
|---|
| End bp | 1621623 |
|---|
| Gene Length | 3297 bp |
|---|
| Protein Length | 1098 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639805027 |
|---|
| Product | error-prone DNA polymerase |
|---|
| Protein accession | YP_952367 |
|---|
| Protein GI | 120402538 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0587] DNA polymerase III, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.94615 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTTGGC ATACCGGTCC GCCGAGCTGG ACCGAGATGG AGCGCGTGCT CTCCGGTAAG
CCGCGTCGCG CCGGCTGGCC GATCGATCAG CAGATCGGCG ACGGCGGGGA CAGCCCCGCC
TGGTCGCGCA AACGCGGGGA GTATCACGCG CCGGAGGGGC CCGGCGCGCA GGAGTCGTCG
ACGCCGTATG CGGAGCTGCA CGCCCACTCG GCCTACAGCT TTCTGGACGG CGCCAGCACG
CCGGAGGAAC TCGTGGAGGA GGCCGCCCGG CTGAACCTGC GGGCCATCGC GCTGACCGAC
CACGACGGGC TCTACGGCGT GGTGCGGTTC GCCGAGGCGG CCAGGGAACT CGACGTGGCG
ACGGTGTTCG GCGCGGAATT GTCCCTGGGC GGGGGAACCC GCACCGACGT CCCGGACCCG
CCCGGGCCGC ACCTGCTGGT GCTGGCCCGC GGGCCGGAGG GCTACCGGCG GTTGTCGCGG
CAGCTGGCCG CGGCGCATCT GGCCGGTGGT GAGAAGGGGG TGCTGCGCTA CGACTTCGAC
GCACTGACCG AGGCCGCGGG CGGGCATTGG CAGATCCTCA CCGGATGCCG TAAAGGGCAT
GTCCGGCAAG CTCTTTCCAC TGGCGGCCCG GAGGCGGCCG AGGCCGCGCT GGCCGATCTG
GTCGACCGCT TCGGTCCGGA CCGGGTGACC GTCGAGCTCA CCCACCACGG CCATCCACTC
GACGACGAGC GCAACGCCGC GCTGGCCGCG CTGGCGCCGC GGTTCGGTCT GGGCGTCGTC
GCCACCACCG CCGCGCACTT CGCCGAACCG GCCAGGGGTC GGCTCGCGAT GGCGATGGGC
GCCATCCGGG CCCGCAACTC GATCGATGAA GCCGCGGGTT ACCTTGCGCC GCTGGGTGGT
TCGCATCTGC GCTCGGGCGA CGAGATGGCC CGGATGTTCG CCCACTGCCC CGAGGTGGTG
ACGGCCGCGG CCGAACTCGG CGAACAGTGC GCCTTCGGTC TCGCCCTGAT CGCACCGCAG
CTGCCGCCGT TCGACGTGCC CGACGGGCAC ACCGAGAGCA GCTGGCTGCG GCATCTGGTG
ATGCAGGGCG CCCGCGAGCG CTACGGCCCC CCGGAGCGGG CCTCCCGGGC GTACGCGCAG
ATCGAGCACG AGCTGGCGGT GATCGAGCAG CTGAACTTTC CCGGCTACTT CCTCGTGGTG
CACGACATCA CCAGGTTCTG CCGGGACAAC AACATCCTGT CCCAGGGCCG GGGGTCGGCG
GCCAACTCCG CGGTCTGCTA TGCGCTCAAG GTCACCAACG TCGATCCGAT CGCCAACGAC
CTGCTGTTCG AACGCTTCCT GTCCCCGGCC CGCGACGGGC CACCCGACAT CGACATCGAC
ATCGAATCCG ACCTGCGCGA GAACGCGATC CAGTACGTCT ACCAGCGTTA CGGGCGGGAG
TACGCCGCCC AGGTCGCCAA CGTGATCACC TACCGGGGGC GCAGCGCGGT GCGGGACATG
GCCCGTGCGC TCGGGTTCTC CCAGGGTCAG CAGGACGCCT GGAGCAAGCA GGTCAGCCAG
TGGGGGAATT TGGCGGACGC CACGCACGTC GAGGACATCC CCGGGCCGGT GGTCGACCTG
GCCAAGCAGA TCTCGAATCT GCCCCGGCAC ATGGGCATCC ATTCCGGCGG CATGGTGATC
TGCGACCGTC CGATCGCCGA CGTGTGCCCG GTCGAATGGG CGCGGATGGA GAACCGCAGC
GTCCTGCAAT GGGACAAGGA TGATTGCGCG GCAATCGGTT TGGTCAAGTT CGACCTGCTG
GGCCTCGGCA TGCTCTCAGC GCTGCACTAC GCCATCGACC TGGTCGCCGA GCACAAGGGC
ATCGAGGTCG ATCTGGCGAA GCTGGATCTG TCGGAACCCG CCGTGTACGA GATGTTGGCC
CGCGCGGACT CGGTCGGGGT GTTCCAGGTG GAGTCGCGCG CCCAGATGGC CACGCTGCCC
CGGCTCAAGC CGCGGATGTT CTACGACCTG GTGGTCGAGG TGGCGCTGAT CCGGCCGGGG
CCGATCCAGG GTGGGTCGGT ACACCCGTAC ATCAAGCGCC GCAACGGGCA GGAGGCGGTC
ACCTACGACC ATCCGTCGAT GGAGTCGGCG CTGCGCAAGA CGTTGGGGGT GCCGCTTTTT
CAGGAGCAGC TGATGCAGCT GGCCGTCGAC TGCGCCGGTT TCACCCCGGC CGAGGCCGAC
CAGTTGCGGC GCGCGATGGG CTCGAAACGC TCGACGGAGA AGATGCGCAG GCTGCGTGGG
CGCTTCTTCG ACGGCATGGC CGAACTGCAC GGCGTCACCG GCGACGTGGC GCAGCGGATC
TACGAGAAGC TGGAAGCGTT CGCCAACTTC GGCTTCCCGG AGAGTCATTC ACTGAGCTTC
GCGTCGCTGG TGTTCTATTC GTCGTGGTTC AAGCTGCACC ACCCGGCGGC GTTCTGCGCC
GCGCTGCTGC GGGCGCAACC GATGGGCTTC TACTCACCGC AGTCACTGGT CGCCGACGCC
CGCAGGCACG GCGTCGTCGT GCACGGACCC GACGTGAACG CCGGCCTGGC GCACGCCACG
CTGGAGAACC ACGGGCTGGA TGTGCGGCTG GGGCTGGGCG GCGTCCGTCA CATCGGCGAC
GAGCTCGCCG AACGCCTGGT CGGGGAGCGG AAAGCCCACG GGCCGTTCAC TTCTCTGACC
GATCTGACTC GACGGGTGCA GCTGTCGGTA CCCCAGACCG AGGCGCTGGC CACCGCGGGT
GCGCTGGGCT GTTTCGGGAT CACCCGGCGG GAGGGGCTGT GGGCCGCGGG AGCAGCCGCC
ACCGAACGGC CCGACCGGCT GCCCGGGGTC GGGTCGTCCT CCCATGTGCC GTCGCTGCCA
GGCATGACCG AGCTGGAGCT GACCGTCGCC GACGTGTGGG CCACCGGGGT GTCGCCGGAC
CGGTACCCGA CCGAGTTCCT GCGCGAGGAC CTGGACGCGA TGGGGGTGGT GCCCGCCGAT
CAGCTGTTGT CGCTGCCCGA CGGCACCCGG GTGCTGGTGG CCGGAGCGGT GACCCACCGG
CAGCGGCCCG CCACCGCGCA GGGGGTGACG TTCATGAACC TCGAAGACGA AACCGGTATG
GTCAATGTGT TGTGCTCACA AGGGGTTTGG GCACGTCACC GTAAGCTGGC GCAGACGGCG
TCGGCGCTGG TGGTGCGCGG CATCGTGCAG AACGCCACCG GGGCCGTCAC CGTGGTCGCC
GACCGGATGG GCAGGCTCAG TCTGCGGGCG GCGTCGAAGT CCCGCGACTT CCGCTAG
|
|---|
| Protein sequence | MGWHTGPPSW TEMERVLSGK PRRAGWPIDQ QIGDGGDSPA WSRKRGEYHA PEGPGAQESS
TPYAELHAHS AYSFLDGAST PEELVEEAAR LNLRAIALTD HDGLYGVVRF AEAARELDVA
TVFGAELSLG GGTRTDVPDP PGPHLLVLAR GPEGYRRLSR QLAAAHLAGG EKGVLRYDFD
ALTEAAGGHW QILTGCRKGH VRQALSTGGP EAAEAALADL VDRFGPDRVT VELTHHGHPL
DDERNAALAA LAPRFGLGVV ATTAAHFAEP ARGRLAMAMG AIRARNSIDE AAGYLAPLGG
SHLRSGDEMA RMFAHCPEVV TAAAELGEQC AFGLALIAPQ LPPFDVPDGH TESSWLRHLV
MQGARERYGP PERASRAYAQ IEHELAVIEQ LNFPGYFLVV HDITRFCRDN NILSQGRGSA
ANSAVCYALK VTNVDPIAND LLFERFLSPA RDGPPDIDID IESDLRENAI QYVYQRYGRE
YAAQVANVIT YRGRSAVRDM ARALGFSQGQ QDAWSKQVSQ WGNLADATHV EDIPGPVVDL
AKQISNLPRH MGIHSGGMVI CDRPIADVCP VEWARMENRS VLQWDKDDCA AIGLVKFDLL
GLGMLSALHY AIDLVAEHKG IEVDLAKLDL SEPAVYEMLA RADSVGVFQV ESRAQMATLP
RLKPRMFYDL VVEVALIRPG PIQGGSVHPY IKRRNGQEAV TYDHPSMESA LRKTLGVPLF
QEQLMQLAVD CAGFTPAEAD QLRRAMGSKR STEKMRRLRG RFFDGMAELH GVTGDVAQRI
YEKLEAFANF GFPESHSLSF ASLVFYSSWF KLHHPAAFCA ALLRAQPMGF YSPQSLVADA
RRHGVVVHGP DVNAGLAHAT LENHGLDVRL GLGGVRHIGD ELAERLVGER KAHGPFTSLT
DLTRRVQLSV PQTEALATAG ALGCFGITRR EGLWAAGAAA TERPDRLPGV GSSSHVPSLP
GMTELELTVA DVWATGVSPD RYPTEFLRED LDAMGVVPAD QLLSLPDGTR VLVAGAVTHR
QRPATAQGVT FMNLEDETGM VNVLCSQGVW ARHRKLAQTA SALVVRGIVQ NATGAVTVVA
DRMGRLSLRA ASKSRDFR
|
|---|
| |