Gene Mvan_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1517 
Symbol 
ID4648375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1605040 
End bp1605603 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content70% 
IMG OID639805015 
ProductTenA family transcription regulator 
Protein accessionYP_952355 
Protein GI120402526 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.368689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGACG AACTCTGGGC CGCGGCCACC CGACACCGAT TCCTCGCCCA TGTGCGCGAC 
GGCACCATCA CCGACGCGGA CTTCGACCGA TGGCTGGTGC AGGACGCGGT GTTCGTCGCC
GACCTGCTGA CGTTCCAGGC ACGGCTGCTC GCCCGGGCCC CGCGGCCCGC GCAGGCCACG
CTTGCCGGAG GCTGTGCCGC ACTGGTGTCC GAGCTCGACT GGTTCGACCA GCAGGCGGCG
CAGCGCGGTA TCGCGATGGA CCAGCCCGTA CTGCCGGCGA CGTCGGACTA CCGAAAACTG
CTGCAGCGCC TCGACACTGC GCCCTACGAC ACCGCCGTCA CCGCGCTGTG GGTCATCGAG
CAGGTGTATC TGCTGGCGTG GACAACGGCC GCATCAGACT CGTCCCCGTA CCGCGAGTTC
GTCGAGCACT GGACCGATCC CGGCTTCGCC GGCTACGTGC GCGCGCTCGA GGAACTCGCC
ACCAGGGACG GCCACGACGA GCTGATCGCC GAGGTGCTGT CCCACGAGGT GGCGTTCTGG
GACATGGCGT TGACGGGCGG GTGA
 
Protein sequence
MLDELWAAAT RHRFLAHVRD GTITDADFDR WLVQDAVFVA DLLTFQARLL ARAPRPAQAT 
LAGGCAALVS ELDWFDQQAA QRGIAMDQPV LPATSDYRKL LQRLDTAPYD TAVTALWVIE
QVYLLAWTTA ASDSSPYREF VEHWTDPGFA GYVRALEELA TRDGHDELIA EVLSHEVAFW
DMALTGG