Gene Mvan_1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1489 
Symbol 
ID4645382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1579844 
End bp1580866 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content73% 
IMG OID639804987 
Productputative DNA-binding/iron metalloprotein/AP endonuclease 
Protein accessionYP_952327 
Protein GI120402498 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.778881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.495254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCC TTGCCGTCGA GAGTTCCTGC GACGAAACCG GCGTCGGTAT CGCCGAGCTC 
GGCGACGACG GGACCGTGAC GCTGCTGGCC GACGAGGTGG CCTCCAGCGT CGACGAGCAC
GCGCGCTTCG GCGGCGTGGT GCCCGAGATC GCGTCCCGCG CGCACCTGGA GGCGCTGGGG
CCGACGATGC GGCGGGCGCT GGCGACGGCG GGCGTGTCCA AGCCGGATGT CGTCGCGGCC
ACCATCGGAC CAGGTCTGGC GGGGGCGCTG CTGGTGGGAG TGGCTGCGGC CAAGGCGTAT
TCGGCGGCGT GGCAGGTGCC GTTCTATGCG GTGAACCACC TCGGGGGCCA TCTGGCCGCC
GACGTGTTCG ACCACGGCCC GCTGCCGGAG AGCATCGGGC TGCTGGTGTC GGGCGGGCAC
ACGCACCTGC TGCACGTGCG TTCGCTGGGG GAGCCGATCG TCGAACTGGG CTCCACCGTC
GATGACGCCG CCGGCGAGGC GTACGACAAG ATCGCCCGGC TGCTGGGGCT CGGGTATCCG
GGCGGTCGGG TGTTGGATGA ACTTGCGCGC GAAGGGGATC CGGCGGCGAT CACGTTCCCG
CGGGGAATGA CGGGGCCGCG CGACGATCCG TACGCGTTCA GCTTCTCGGG GCTCAAGACC
GCCGTGGCGC GGTACGTGGA GAGCCATCCG GAGGCGTCGC AGGCCGACGT GGCCGCGGGG
TTCCAGGAGG CGGTGGCCGA TGTGCTCACC GCCAAGGCGG TGCGCGCGGC CAAGGACCTC
GGGGTGTCGA CGCTGCTGAT CGCCGGGGGA GTCGCGGCGA ATTCGCGGCT GCGGGAGCTG
GCGGGGCAGC GGTGCGCCGA CGCGGGGATG ACGCTGCGGA TTCCGCGGCC GCGGTTGTGC
ACGGACAACG GCGCGATGAT CGCGTCGTTC GCGGCCCATC TGATCGCCGC GGGGGCGCGG
CCGTCGCCGC TGGACGCGGC CAGTGACCCG GGGCTGCCGG TGGTACAGGG GCAGGTGGCA
TGA
 
Protein sequence
MIILAVESSC DETGVGIAEL GDDGTVTLLA DEVASSVDEH ARFGGVVPEI ASRAHLEALG 
PTMRRALATA GVSKPDVVAA TIGPGLAGAL LVGVAAAKAY SAAWQVPFYA VNHLGGHLAA
DVFDHGPLPE SIGLLVSGGH THLLHVRSLG EPIVELGSTV DDAAGEAYDK IARLLGLGYP
GGRVLDELAR EGDPAAITFP RGMTGPRDDP YAFSFSGLKT AVARYVESHP EASQADVAAG
FQEAVADVLT AKAVRAAKDL GVSTLLIAGG VAANSRLREL AGQRCADAGM TLRIPRPRLC
TDNGAMIASF AAHLIAAGAR PSPLDAASDP GLPVVQGQVA