Gene Mvan_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1443 
Symbol 
ID4647114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1531778 
End bp1532329 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content69% 
IMG OID639804943 
Producthypothetical protein 
Protein accessionYP_952283 
Protein GI120402454 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.197682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTCA CTTATGACAC CGAGCTCACA CTGCGTGCAG CGGGTGTCCT GATCAACAGC 
GACCGAGTGG ACGGCGACCA GCTGTCCGAC CTCGCCGCGC TCGACGAGTA CCTGGACCAC
TTCGGCTGGA CGGGCAGGCG CGACCACGAC GCCGCCGAGC TGGAGTCGGT GCGCCGGCTG
CGGACCCGCC TGGCCCGGAT CTGGGAGGCC GCGGACGACG AGACCCGGGC CGTCGGACAC
GTCAACGCGC TGCTCGCCGA CACCAAGGCG TCGCCGTGGC TGACCCGCCA CCCCGAGATG
CCCGAGTGGC ACCTGCACCT CGCCTCGATC CATGATCCGC TGTGGCAGCG GATGGGTGCC
GAGATGGCGA TGGCGCTGGC CGACCTGATC CGCGCGGGGG AGTTGCGCAG ACTCAAGATC
TGCGCCGCCC CGGACTGTCA CGCGGTGCTG GTGGACCTGT CACGCAACCG GTCGGGCAAG
TTCTGCGACA CCGGCAACTG CGGCAACCGT CAGCACGTCG CCGCCTACCG GGAACGCCGC
TCCAACAAGT GA
 
Protein sequence
MLFTYDTELT LRAAGVLINS DRVDGDQLSD LAALDEYLDH FGWTGRRDHD AAELESVRRL 
RTRLARIWEA ADDETRAVGH VNALLADTKA SPWLTRHPEM PEWHLHLASI HDPLWQRMGA
EMAMALADLI RAGELRRLKI CAAPDCHAVL VDLSRNRSGK FCDTGNCGNR QHVAAYRERR
SNK