| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1436 |
|---|
| Symbol | |
|---|
| ID | 4647107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 1525930 |
|---|
| End bp | 1526982 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639804936 |
|---|
| Product | DNA-directed RNA polymerase subunit alpha |
|---|
| Protein accession | YP_952276 |
|---|
| Protein GI | 120402447 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
|---|
| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.763793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATTT CACAGCGCCC CACCCTCAGC GAAGATGTGC TGGCCGAGAA CCGGTCCCAG
TTCGTCATCG AGCCGCTGGA GCCCGGATTC GGTTACACCC TCGGGAACTC GCTGCGCCGC
ACGCTGCTGT CGTCCATCCC GGGCGCGGCC GTCACCAGCA TCCGCATCGA CGGTGTGCTG
CACGAGTTCA CCACCGTGCC CGGGGTCAAG GAAGACGTCA CCGACATCAT CCTGAACCTC
AAGGGTCTGG TCGTGTCCTC CGAGGAGGAC GAGCCGGTCA CCATGTACCT GCGCAAGCAG
GGACCGGGTG AGGTCACCGC GGGTGACATC GTGCCGCCGG CCGGCGTCAC GGTGCACAAC
CCCGACATGC ACATCGCCAC CCTGAACGAC AAGGGCAAGC TCGAGGTCGA GCTGGTCGTC
GAGCGCGGCC GCGGCTACGT GCCTGCCGTG CAGAACAAGG CCTCCGGCGC CGAGATCGGC
CGCATCCCGG TCGATTCGAT CTACTCGCCG GTGCTCAAGG TCACCTACAA GGTGGAGGCC
ACCCGTGTCG AGCAGCGCAC CGACTTCGAC AAGCTGATCC TCGACGTCGA GACCAAGAAC
TCGATCACCC CGCGTGACGC GCTGGCTTCG GCCGGTAAGA CGCTGGTCGA ATTGTTCGGT
CTGGCACGGG AACTCAACGT CGAGGCCGAG GGCATCGAGA TCGGCCCGTC GCCGGCGGAG
GCCGATCAGG CCGCGCACTT CGCGCTGCCG ATCGACGATC TGGACCTGAC GGTGCGGTCG
TACAACTGCC TCAAGCGCGA GGGTGTGCAC ACCGTGGGCG AGCTCGTGGC CCGCACGGAG
TCCGATCTGC TGGACATCCG TAACTTCGGC CAGAAGTCCA TCGACGAGGT GAAGATCAAG
CTGCACCAGT TGGGTCTGTC GCTCAAGGAC AGCCCGGCCA GCTTCGATCC GTCCGAGGTG
GCCGGCTACG ACGTCGCCAC CGGCACGTGG AACAGCGACG CCGGCTACGA CCTGGAGGAC
AACCAGGACT ATGCCGAAAC CGAACAGCTC TAG
|
|---|
| Protein sequence | MLISQRPTLS EDVLAENRSQ FVIEPLEPGF GYTLGNSLRR TLLSSIPGAA VTSIRIDGVL
HEFTTVPGVK EDVTDIILNL KGLVVSSEED EPVTMYLRKQ GPGEVTAGDI VPPAGVTVHN
PDMHIATLND KGKLEVELVV ERGRGYVPAV QNKASGAEIG RIPVDSIYSP VLKVTYKVEA
TRVEQRTDFD KLILDVETKN SITPRDALAS AGKTLVELFG LARELNVEAE GIEIGPSPAE
ADQAAHFALP IDDLDLTVRS YNCLKREGVH TVGELVARTE SDLLDIRNFG QKSIDEVKIK
LHQLGLSLKD SPASFDPSEV AGYDVATGTW NSDAGYDLED NQDYAETEQL
|
|---|
| |