Gene Mvan_1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1413 
Symbol 
ID4646433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1503128 
End bp1504834 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content69% 
IMG OID639804913 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_952253 
Protein GI120402424 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAACC GACAACAGCG GGCCTTCGGC CGTCGGCACC CAGCCGATCT GCGGCGGATC 
CACGAACAAC TCGACGAGTT GGCGGCCGAC CGTGACCAGA TGGGCCAATT GCTGCAGGTA
GCGGTCGAGA TCGGCTCCGA TCTCGAACTG AACGCGACCC TGCAGCGCAT CGTGCGTGCC
GCCAGGGGCA TGACCGCGGC CCGGTACGGT GCGATCGGCG TGTGGGGAAC CGACGACCTG
TTGTCCGACT TCGTCCACGA CGGAATGGAC GAGGGTACGG TGCAGGCCGT CGGCCATCCG
CCGGTCGGCA AGGGGCTGTT GGGCTTCCTG CGGCAGGGTA CCGACCCCGT TCGGCTGGAC
AACGCCGCCG AACACCCCTC GGCGGTCGGG TTCCCGCAGC ACCACCCCGC CATGCGGGCG
TTCATCGGCG TGCCGATCGT GATTCGCGGC GAGCCCTTCG GGAGCCTGTA CCTGGCCGAT
GACCGACCCG ATTTCGCCTT TGCCGAGGCG GACGAGATGA CAGTCAGGGC ACTGGCATCG
ATCGCGGCCG TGGCGATCGA CAACGCCCGG CTACTCGACC ACGCCCGGGC CACCGTGCGC
TGGACCGACG CCGGCCGGGA GATCACGGCG GCGGTGCTCG GCGGCGACGA TCCGTACCTG
CGGCCGCTTC AACTCATCGT GGGCCGTGCC TGCGAGCTCA CCGGCGCCGA GCAGGGAATC
GTGCTGGTGG CCTCCGATCC GGAGCAGCCG GTCGACGAGG TCGACACCCT GGTGGTGTCC
ACCGCCGCCG GCCGCTACGC CGATGACGTT CTGGGGCAAC GTGTTCCGGT GCACGGATCG
ACCACCGGCG CGGTGTTCCA GTCGGGCCGA CCGGTCATCA CCGAGGCGTT CGGTCACTCG
ATCCCGTTCT TCACCGACGT CGGCGAGCGA CCGGTGGTCG TGGTGCCACT GCGCTCGGAG
CGGCAGAATC TGGGGGTACT GGCGTTGGCG CGCAACGCCT CCGCGCCACG GTTCCAGGCC
GGCGACCTCG ACCTCGTCCG CGACTACGCC TACCACACGG CGATCGCCAT CGTCATCGCC
AGGGCCCGCG GCACCGCGAA CGAGCTTGCG ATGTTCACCG ACCGGGAGCG CATCGCCCAC
GATCTGCACG ATCAGGTGAT CCAGCGGGTT TTCGCCGTCG GCATGGACCT GCAGGGCGTC
GTCGCCCGAG TGCGATCCCC TGCCCTCAAT GAGCGGCTGT CGAATTCGGT CGACGAACTG
CAGGCGGTGA TCACCGAGAT CCGGTCGACG ATCTTCAATC TGCAGAAGCC GGCCGAGGCG
CATGGTGCTT TCGCCAAACG CATCAGGCAT GCGTTCCAGC GTCTGACCGA GGACCGTGAG
ATGGCCGCGA CGCTGACGGT GTCCGGTCCG ATGGAAGTCG TCGCGCCGTC GCTCGTCGAC
GACGCCGAAG CCGTCGTGTT GGAGGGACTC AGCAACGCCG TCCGCCACTC GGGTGCCGCC
GCCGTCGCCG TCGAGATCGC CGTCGGTGAC GACCTCGTCG TGGAGGTCTG CGACGACGGT
CAGGGCATCC CGGCCGAGAG TCGGCGACGC AGCGGCCTGG CCAACCTTGC CGCCCGGGCC
CGGGCTGCCG GCGGCGAACT CGTGATCGAT ACCCCACCGT CCGGTGGCAC CCGGCTGATC
TGGAGCGTGC CGCTCGCCCG GACGTGA
 
Protein sequence
MSNRQQRAFG RRHPADLRRI HEQLDELAAD RDQMGQLLQV AVEIGSDLEL NATLQRIVRA 
ARGMTAARYG AIGVWGTDDL LSDFVHDGMD EGTVQAVGHP PVGKGLLGFL RQGTDPVRLD
NAAEHPSAVG FPQHHPAMRA FIGVPIVIRG EPFGSLYLAD DRPDFAFAEA DEMTVRALAS
IAAVAIDNAR LLDHARATVR WTDAGREITA AVLGGDDPYL RPLQLIVGRA CELTGAEQGI
VLVASDPEQP VDEVDTLVVS TAAGRYADDV LGQRVPVHGS TTGAVFQSGR PVITEAFGHS
IPFFTDVGER PVVVVPLRSE RQNLGVLALA RNASAPRFQA GDLDLVRDYA YHTAIAIVIA
RARGTANELA MFTDRERIAH DLHDQVIQRV FAVGMDLQGV VARVRSPALN ERLSNSVDEL
QAVITEIRST IFNLQKPAEA HGAFAKRIRH AFQRLTEDRE MAATLTVSGP MEVVAPSLVD
DAEAVVLEGL SNAVRHSGAA AVAVEIAVGD DLVVEVCDDG QGIPAESRRR SGLANLAARA
RAAGGELVID TPPSGGTRLI WSVPLART