Gene Mvan_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1409 
Symbol 
ID4646429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1499289 
End bp1500266 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content68% 
IMG OID639804909 
Producttransketolase, central region 
Protein accessionYP_952249 
Protein GI120402420 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.831703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCA GCTACCGCAC GGCCGTGCAC GACGCGATCG CCGATGCGCT GCGCGACGAC 
CCGCGAGTGC TGTTGATGGG CGAGGACGTC GCTCGTTATG GAGGCACGTA TGCCGTGTCC
AAGGGTCTGC TCGAGGAGTT CGGGCCCGAC CGGGTGCGGG ACACCCCACT GTCGGAGCTG
GGGTTCGTCG GCATCGGAAT CGGCGCTGCG CTAGGGGGAT TGCGGCCGAT CGTCGAGATC
ATGACGGTGA ACTTCAGCCT GCTGGCGCTC GATCAGATCG TCAACACCGC CGCCGCGCTG
CGCCATATGT CCGGCGGACA GTTCTCGGTG CCGCTGGTGG TCAGGATGGC GACCGGGGCG
GGCCGCCAGT TGGCCGCCCA GCACTCGCAC AGCCTGGAGG GCTGGTACGC CCACATCCCG
GGTATCAAAG TGGTTGCCCC GGCGACGGTG GAGGACGCCT ACGGGATGCT GTCCACGGCT
CTGCAGGACC CCGATCCGGT GATCATGTTC GAGCATGTGC AGCTCTACAA CACCTCAGCC
GACGTGGCGG AGCTTGGCGC GCAGGATATT TCGCGGGCGG CGATCCGGCG GCAGGGCTCC
GATGTCTCGC TGATCACCTA CGGCGGCAGT CTGCCCAAGG TGCTCGACGC CGCTGACCAG
CTTGCGCTGG CCGGCATCGA CTGCGAGGTG ATCGACCTGC GGGTGCTGCG GCCGCTGGAC
ACCGAGACGT TCGTCGGCTC GGTGCGCAAG ACGCATCGCG CGGTCATCGT CGACGAAGGC
TGGCGCACAG GCAGCCTCGC GGCCGAGATC AGCACACAGA TCACCGAGCA GGCCTTCTTC
GACCTCGACG CCCCGGTCGC CCGGGTGTGC AGCGCCGAGG TTCCGATCCC CTACGCCCGT
CATCTCGAAC AAGCGGCCCT GCCGCAGCGG GACACGATCG TCGCCGCGGC CCAGGGACTT
TTCGGAGGCC AACCGTGA
 
Protein sequence
MKTSYRTAVH DAIADALRDD PRVLLMGEDV ARYGGTYAVS KGLLEEFGPD RVRDTPLSEL 
GFVGIGIGAA LGGLRPIVEI MTVNFSLLAL DQIVNTAAAL RHMSGGQFSV PLVVRMATGA
GRQLAAQHSH SLEGWYAHIP GIKVVAPATV EDAYGMLSTA LQDPDPVIMF EHVQLYNTSA
DVAELGAQDI SRAAIRRQGS DVSLITYGGS LPKVLDAADQ LALAGIDCEV IDLRVLRPLD
TETFVGSVRK THRAVIVDEG WRTGSLAAEI STQITEQAFF DLDAPVARVC SAEVPIPYAR
HLEQAALPQR DTIVAAAQGL FGGQP