Gene Mvan_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1402 
Symbol 
ID4646422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1493225 
End bp1494052 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content72% 
IMG OID639804902 
ProductUspA domain-containing protein 
Protein accessionYP_952242 
Protein GI120402413 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAC GGGGGAGCCC CCACGGAGTC GTCGTCGGGG TGGACGGGTC GGATTGCTCG 
CTGGCGGCGG TCCGGTGGGC CGCCCGCGAG GCGCACTTCC GCCACGCTCG GCTCGCCATC
GTCCACGTCG TCACCGAGGG CGGGGACGAG GAGGCCGACG CGGTGCTCGC CGAGGCGATG
GCGCAGGGTC GTGACGCCGC CGGCGGCGGC GGATCCGAGA TCGAGACCAG GCGGGTGCAC
GGCAGACCGG TACAGGCACT GGTCGACCTG TCCGGTACAG CGCAGATGAT CGTCGTCGGC
CGCCGCGGCC GCACGGGAAG GCGGCCACCG GGGGTCGGCA GTGTCGGCGC GGGCCAACTG
CACCACGCCC ACTGTCCGGT GGCGATCGTC CACGACGACG CCGACCAGCA GCAACCGAGG
CCCGTCCTGG TCGGTGTCGA CGGGTCGAAG CCCTCGCTTG CCGCGGCGGC AATCGCCTTC
GATGAGGCGT CATGGCGTGG GGCCGACCTG TTGGCCCTGC ACGTGTGCAA GGACGCGGAC
GCGCCGGCCT CTCACGACGC GCAGACCTCG GTGCTCGAAC AGGACGCCGA GGATTTCCTG
ACCGCGTCGC TTGCCGACCT GCGTCAGCAG TATCCGGAGG TCGTCGTGCA TCGGCTGGTG
CGCTTCGGGA AACCGGCCCG TCAGCTGTTG GCGCAGGCGG AACGGGCGCA GCTCGTCGTC
GTCGGCAGCC ACGGCCGCGG CGGATTCGCG GGCAAGCTGC TCGGCTCGGT CAGCGCCGCC
GTGGCAGACG AAGCCCGCGT TCCGGTGATC GTCGCCCGGC AGCCCTAG
 
Protein sequence
MPERGSPHGV VVGVDGSDCS LAAVRWAARE AHFRHARLAI VHVVTEGGDE EADAVLAEAM 
AQGRDAAGGG GSEIETRRVH GRPVQALVDL SGTAQMIVVG RRGRTGRRPP GVGSVGAGQL
HHAHCPVAIV HDDADQQQPR PVLVGVDGSK PSLAAAAIAF DEASWRGADL LALHVCKDAD
APASHDAQTS VLEQDAEDFL TASLADLRQQ YPEVVVHRLV RFGKPARQLL AQAERAQLVV
VGSHGRGGFA GKLLGSVSAA VADEARVPVI VARQP