Gene Mvan_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1387 
Symbol 
ID4644603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1474811 
End bp1475611 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content70% 
IMG OID639804887 
ProductUspA domain-containing protein 
Protein accessionYP_952227 
Protein GI120402398 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.316543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.887098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGG CAGGCACCTC CTCGCCCGTG ATCGCCGGAA TCGACGGGTC GGCCACGGCG 
CTTGCCGCCG CACTGTGGGC GGTCGACGAG GCGGCCGGCC GGGGCGCCCC GGTCCACCTG
GTCTACACGA CCAAGCCGAC GGATCGCCAC GCCGCCGAGT ACGCCGAGGA CGTGCGCCGC
GGCCACGAGT GTCTGCACGA GGCGCGCAGC GCCGTCGAAG CCACCGGCAA GCCGGTGACA
GTCGAGACCA CGGTGGTGGA CGGACCGGCC GCGCAGGCAC TGATCTCGCT CTCGGAGCAG
GCTCAGATGG TGTGCGTCGG CTCCGTCGGT ATCGGCCGCT ACGCCAGGTC GATCCTCGGC
TCCACGGCGG CCGAGGTGGC CGAGCGGGCC CACTGCCCCG TCGCGGTGAT CCGTCCTCAC
CCACACGCAG GCGAGCACGG ATTCCACTGG ATCGTCGTCG CGGTCACCGA GCAACCGCAG
AACGCTGAAG TCGTCGAGCA TGCGTTGCGG GAAGCCGCAC TCCGGCACGT TCCCGTGCTG
GCACTCGGCG ACGGTCGCAC CGAGGATTCG GCCGATGCAC TCGAGCGCCA CCTCCGGTCA
TGGCGCGAGC GTTACCCCGA CGTGCACATC TATCCCATCG CCGGCAGCGC AGACGTCACC
CACTTCCTCA AGAAGCACGA CGAACCGGTG ATGCTGACGG TGATCGGCAG CGACGAGGCC
GGTGAAGTCG CGAAGATCAT CGGGCACGGT CACTCCCTGC TCCGACGCGG CACCTCCTCG
GCGCTCGTGG TGCGGTCCTA G
 
Protein sequence
MATAGTSSPV IAGIDGSATA LAAALWAVDE AAGRGAPVHL VYTTKPTDRH AAEYAEDVRR 
GHECLHEARS AVEATGKPVT VETTVVDGPA AQALISLSEQ AQMVCVGSVG IGRYARSILG
STAAEVAERA HCPVAVIRPH PHAGEHGFHW IVVAVTEQPQ NAEVVEHALR EAALRHVPVL
ALGDGRTEDS ADALERHLRS WRERYPDVHI YPIAGSADVT HFLKKHDEPV MLTVIGSDEA
GEVAKIIGHG HSLLRRGTSS ALVVRS