| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1360 |
|---|
| Symbol | |
|---|
| ID | 4646001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 1444158 |
|---|
| End bp | 1445030 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639804860 |
|---|
| Product | 3-hydroxyisobutyrate dehydrogenase |
|---|
| Protein accession | YP_952200 |
|---|
| Protein GI | 120402371 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.117709 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA TCGCGTTCCT GGGGTTGGGC AACATGGGCG GCCCGATGGC CGCGAACCTG
GTTGCGGCCG GCCAGACGGT GCATGCCTTC GACCTGGTGA CCGAGCTGAA AGAGGCGGCG
AAGGCCAAGG GCGCGAAGGT GTTCGACAGC GGTGCCGCCG CCGTCGCCGA CGCCGACGTG
GTGATCACCT CGCTGCCCAA CGGCAACATC GTCAAAGCCG TCTACGACGA GGTGGTGCCC
GCCGCCAAGG CGGGTGCGCT GCTGATCGAC ACCTCCACGA TCTCCGTCGA CGACGCCCGC
GCCATCCACG ACCAGGCGAC CGAGAAGGGG CTGGCCCAGA TCGACGCGCC GGTGTCCGGT
GGCATCAAGG GCGCGACCGC CGGCACGCTG GCGTTCATGG TCGGCGGCGA GGACGAAGCG
TTCGAACGCG CCAAGCCGGT GCTGGAGCCC ATGGCGGGCA AGATCATCCA CTGCGGCGCC
TCGGGTGCCG GGCAGGCCGC CAAGCTGTGC AACAACATGG TGCTGGCGGT GCAGCAGATC
GCGATCGGCG AGGCCTTCGT GCTCGCCGAG AAGCTCGGCC TGCCCGCCCA GTCGTTGTTC
GACGTGATCA CCGGCGCGAC CGGCAACTGC TGGGCCGTGC ACACCAATTG TCCGGTGCCC
GGACCGGTTC CGACGTCACC GGCGAACAAC GATTTCAAGC CCGGCTTCGC GACCGCGCTG
ATGAACAAGG ATCTCGGGCT GGCGATGGCG GCGGTGAGCT CGACCGGGAG TTCGGCACCG
CTGGGCACCC ATGCGGCCGA GATCTACGCC GAGTTCAACA AGGAGCACGC CGACAAGGAC
TTCAGCGCGA TCATCGAGGC CCTGCGCGGC TGA
|
|---|
| Protein sequence | MTTIAFLGLG NMGGPMAANL VAAGQTVHAF DLVTELKEAA KAKGAKVFDS GAAAVADADV
VITSLPNGNI VKAVYDEVVP AAKAGALLID TSTISVDDAR AIHDQATEKG LAQIDAPVSG
GIKGATAGTL AFMVGGEDEA FERAKPVLEP MAGKIIHCGA SGAGQAAKLC NNMVLAVQQI
AIGEAFVLAE KLGLPAQSLF DVITGATGNC WAVHTNCPVP GPVPTSPANN DFKPGFATAL
MNKDLGLAMA AVSSTGSSAP LGTHAAEIYA EFNKEHADKD FSAIIEALRG
|
|---|
| |