| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1339 |
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| Symbol | rpsE |
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| ID | 4643695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 1425791 |
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| End bp | 1426468 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639804839 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_952179 |
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| Protein GI | 120402350 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000696393 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGGCCG AGCAGGCTGT AGGAGCCGGC GGGCCGTCGA GCGACGGCCG CGACGGCGGC
AGGGGTGACC GCGGTGGCCG TGGCCGCCGC GACGATCGTG GTGGCCGTGG TGGCCGCGAC
GACCGGGAGA AGAGCCAGTA CCTGGAGCGG GTCGTCACGA TCAACCGCGT CTCCAAGGTG
GTCAAGGGCG GTCGCCGGTT CAGCTTCACC GCGCTGGTGA TCGTCGGCGA CGGCAAGGGC
ATGGTCGGTG TCGGTTACGG CAAGGCCAAA GAGGTTCCCG CCGCGATCGC CAAGGGTGTC
GAGGAAGCAC GCAAGAACTT CTTCCGGGTT CCGCTGATCG GCGGCACCGT GACCCACCCC
GTCCAGGGTG AGGCCGCGGC CGGAGTGGTC ATGCTGCGTC CGGCCAGCCC CGGTACCGGT
GTCATCGCCG GTGGCGCCTG CCGCGCGGTG CTGGAATGTG CCGGGGTGCA CGACGTCCTG
GCCAAGTCGC TGGGTAGCGA CAACGCGATC AACGTGGTGC ACGCCACCGT TGCCGCGCTG
AAGCTGCTGC AGCGTCCCGA AGAGGTCGCG GCCCGCCGTG GCCTGCCGAT CGAGGATGTA
GCGCCCGCCG GCATGCTCCG GGCCCGCCGT GAGGCGGAGG CCCTGGCCGC CAGCGCCGCG
CGTGAGGGAA CGGCTTAA
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| Protein sequence | MMAEQAVGAG GPSSDGRDGG RGDRGGRGRR DDRGGRGGRD DREKSQYLER VVTINRVSKV
VKGGRRFSFT ALVIVGDGKG MVGVGYGKAK EVPAAIAKGV EEARKNFFRV PLIGGTVTHP
VQGEAAAGVV MLRPASPGTG VIAGGACRAV LECAGVHDVL AKSLGSDNAI NVVHATVAAL
KLLQRPEEVA ARRGLPIEDV APAGMLRARR EAEALAASAA REGTA
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