Gene Mvan_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1296 
Symbol 
ID4648430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1388660 
End bp1389847 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content69% 
IMG OID639804796 
Productradical SAM domain-containing protein 
Protein accessionYP_952136 
Protein GI120402307 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0595995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCG CCGCCCCGGT ACCCCGGCTG GTCGACCAGT TCGAGCGCGG CCTGGACGCG 
CCGATCTGCC TGACGTGGGA GCTCACCTAC GCCTGCAACC TGTCCTGCGT GCACTGCCTG
TCGTCGTCGG GTAAGCGCGA TCCGCGCGAG CTGTCCACCC GGCAGTGCAA GGACATCATC
GACGAGCTCG AGCGCATGCA GGTGTTCTAC GTGAACATCG GCGGCGGCGA ACCCACCGTG
CGCAGCGACT TCTGGGAGCT CGTCGACTAC GCGACCGAGC ACCACGTCGG GGTCAAGTTC
TCCACCAACG GTGTGCGTAT CACTCCCGAG GTGGCCGCGA AACTGGCCGC CAGCGACTAC
GTGGACGTGC AGATCTCGCT CGACGGCGCC ACCGCCGAGG TCAACGACAC GGTGCGCGGA
CCGGGTTCGT TCGCGATGGC CGTTCGCGCG CTGGAGAACC TCAAGGCGGC AGGCTTCAAG
GACGCGAAGA TCTCCGTGGT GGTGACCCGC CACAACATCG ACCAACTCGA CGACTTCAAG
GCGCTGGCCG ACACCTACGG CGCCACCCTG CGCATCACCC GGCTGCGCCC CTCGGGCCGC
GGCGCCGACG TGTGGGACGA ACTGCATCCC ACCCCGGCCC AGCAGGTCCA GCTCTACGAC
TGGCTGGTCG CCCACGGCGA GCGGGTGCTC ACCGGCGACT CGTTCTTCCA CCTGTCGGGC
CTCGGTGAGC CAGGCGCGCT GGCCGGCCTG AACCTGTGCG GCGCGGGCCG CGTGGTCTGC
CTGATCGACC CGGTCGGCGA CGTCTACGCC TGCCCGTTCG CCATCCATGA CAAGTTCCTG
GCCGGAAACG TGTTGTCCGA CGGGGGATTC GACACCGTCT GGAAGCACTC CGAGCTGTTC
CGCGAACTGC GTGAGCCGCA GTCGGCCGGC GCCTGCAGCG GCTGCGGGCA CTACGACGCG
TGCCGCGGTG GCTGCATGGC CGCCAAGTTC TTCACCGGGC TCCCGATGGA CGGCCCGGAC
CCCGAGTGCG TGCAGGGCTA CGGCGAGCCG GCGCTGGCAC TCGACCGCGA CAAACCCCGC
TCGAGCGTCG ACCACTCCCG CTCGGGCGGC CGCACGCCGA AGGGCCCCAT CCCGCTCACC
CTGCTGAGCG CTCCTCCCAA GAAGTTCTGC AACGAAAGTC CGGTATAG
 
Protein sequence
MTLAAPVPRL VDQFERGLDA PICLTWELTY ACNLSCVHCL SSSGKRDPRE LSTRQCKDII 
DELERMQVFY VNIGGGEPTV RSDFWELVDY ATEHHVGVKF STNGVRITPE VAAKLAASDY
VDVQISLDGA TAEVNDTVRG PGSFAMAVRA LENLKAAGFK DAKISVVVTR HNIDQLDDFK
ALADTYGATL RITRLRPSGR GADVWDELHP TPAQQVQLYD WLVAHGERVL TGDSFFHLSG
LGEPGALAGL NLCGAGRVVC LIDPVGDVYA CPFAIHDKFL AGNVLSDGGF DTVWKHSELF
RELREPQSAG ACSGCGHYDA CRGGCMAAKF FTGLPMDGPD PECVQGYGEP ALALDRDKPR
SSVDHSRSGG RTPKGPIPLT LLSAPPKKFC NESPV