Gene Mvan_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1278 
Symbol 
ID4648412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1370736 
End bp1371311 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content67% 
IMG OID639804778 
ProductTetR family transcriptional regulator 
Protein accessionYP_952118 
Protein GI120402289 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.190846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.885926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTTC GGCCGCCACG GACGGCCAAG CTCAGCCGAG ACGCCATCGT CAACGCCGCG 
CTGACCTTCC TCGACCGCGA AGGTTGGGAC GCGCTGACCA TCAACGCGCT GGCCAACCAG
CTCGGCACCA AGGGTCCGTC GCTCTACAAC CACGTGCACA GCCTCGACGA TCTGCGCCGC
ACGGTGCGCA TGCACGTCGT CGGCGACATC ATCGAGATGC TCAACACGGT CGGGAAGGGC
CGCACCCCCG ACGACGCGGT GATGGTGATG GCCAGCGCCT ACCGCAGCTA TGCCCACCAC
CATCCGGGCC GGTACTCGGC GTTCACCCGG ATGCCGCTGG GCGGTGACGA CCCGGAGTTC
ACCGAGGCCA CCAGGGCCGC GGCGGCGCCC GTCATCTCGG TGTTGGAGAC TTTCGGTCTG
GAAAGCGAGT CCGCGTTCTA CGCGGCGCTG GAGTTCTGGT CGGCGATGCA CGGCTTCGTG
CTGTTGGAGA TGACCGGGGT GATGAGCGGC ATTGACACCG ACGCCGTATT CACCGATATG
GTGGCCCGGT TGGCCGCCGG TATGCAGCTC CGCTGA
 
Protein sequence
MAVRPPRTAK LSRDAIVNAA LTFLDREGWD ALTINALANQ LGTKGPSLYN HVHSLDDLRR 
TVRMHVVGDI IEMLNTVGKG RTPDDAVMVM ASAYRSYAHH HPGRYSAFTR MPLGGDDPEF
TEATRAAAAP VISVLETFGL ESESAFYAAL EFWSAMHGFV LLEMTGVMSG IDTDAVFTDM
VARLAAGMQL R