| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1261 |
|---|
| Symbol | |
|---|
| ID | 4648602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 1353751 |
|---|
| End bp | 1354530 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639804761 |
|---|
| Product | endonuclease IV |
|---|
| Protein accession | YP_952101 |
|---|
| Protein GI | 120402272 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0648] Endonuclease IV |
|---|
| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.645529 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.628172 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGCCC GCATCACTAG ACTCGACGCC GTGCTCATCG GTTCCCACGT CCACGGCGAC
GATCCCCTGG CAGCGGCGGA GGCGGACGGC GCCGATGTCG TGCAGTTCTT CCTCGGAAAC
CCGCAGAGCT GGAAGAAGCC CCCGCCACGC GAGGACGCCG AGGTGCTCAA GGCGTCGCCG
GTGCCGATCT ATGTGCATGC GCCGTACCTG ATCAACGTCG CGTCGGCGAA CAACCGGGTG
CGCATTCCGT CGCGAAAGAT CCTGCAGGAC ACCTGCGATG CGGCGTCGGA GATCGGCGCC
ACCGCGGTGA TCGTGCACGG TGGCCACGCC GACGACAACG ACATGGATGC CGGCTTCGAG
CGGTGGGTGA AGGCGTTGGC CAGTCTGAAG TCCGACGTGC CGGTCTATCT GGAGAACACC
GCCGGCGGTG ACCACGCCAT GGCCCGGCAT TTCGACACCA TCGCCCGGCT GTGGGATCAC
ATCGGCGACA CCGGCATCGG CTTCTGCCTG GACACCTGCC ACGCCTGGGC GGCGGGCGAG
GCGTTGATCG ACGCCGTGGA GCGGATCAAG GGCATCACCG GGCGTATCGA CCTGGTGCAC
TGCAACGATT CCCGCGACGC CGCCGGGTCG GGCGCGGACC GGCACGCCAA CTTCGGCTCC
GGCCAGATCG ATCCGCAGCT GCTCGTCGCC GTGGTCAAGG CCGCCGGGGC GCCGGTGATC
TGCGAGACCT CCGACGAGGG TCGCAAGGAC GACATCGCTT TCCTGCGCGA CAACCTCTGA
|
|---|
| Protein sequence | MSARITRLDA VLIGSHVHGD DPLAAAEADG ADVVQFFLGN PQSWKKPPPR EDAEVLKASP
VPIYVHAPYL INVASANNRV RIPSRKILQD TCDAASEIGA TAVIVHGGHA DDNDMDAGFE
RWVKALASLK SDVPVYLENT AGGDHAMARH FDTIARLWDH IGDTGIGFCL DTCHAWAAGE
ALIDAVERIK GITGRIDLVH CNDSRDAAGS GADRHANFGS GQIDPQLLVA VVKAAGAPVI
CETSDEGRKD DIAFLRDNL
|
|---|
| |