Gene Mvan_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1260 
Symbol 
ID4648601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1353061 
End bp1353708 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content65% 
IMG OID639804760 
ProductDNA-binding protein 
Protein accessionYP_952100 
Protein GI120402271 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.933847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.428318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCCAAC TGCTCAAAGT CCAGAATTTC AATGTGTCGG GTGACGGGTT CGGTGCGGGG 
GTGGACCAGA GTTTCGAGCG CCCGTTCGGG CACATCGACC CCAGTTCGAT GTTCGCGTGG
TGCGGCGCGA CAGCAAGCTG GCCCAACCGC ACCGAGCCTG GCGGCACTCG CGGCCTCGAC
GACTACTTCA CGCGGGATTT CAGCCACAAC ATCGGCGCAG AGATCATGGG GCGCAACAAG
TTCAGCCCAC ATCGCGGTCC GTGGCGGGAC CACGAATGGC AGGGGTGGTG GGGCGACGAG
CCGCCGTTCC ACACTCCCGT GTTCGTCATG ACACACCATG AACGGCCGTC GTTCACGCTG
TCGGATACGA CGTTTCATTT CATCACCGCA GACCCCGTCA CGGTCGCCAC ACGGGCCAAG
GAAGCCGCTG CCGGCAAGGA CGTCCGGCTC GGCGGCGGGG CCGCGACCAT CCGGCAGTTC
CTCGACGCCG ATCTCGTCGA CACCCTGCAT GTGGCGGTCT CCCCGGACGT AGAGATCGGC
TCCGGCTCGC GACTGTGGAA GTCTCCGGAT GAGCTCGACG ATCGGTTCCA CCACGAGGTG
GTGCCCAGCC CGAGCGGGGT GACGCACCAC CTGTTCTGGC GGCGATGA
 
Protein sequence
MVQLLKVQNF NVSGDGFGAG VDQSFERPFG HIDPSSMFAW CGATASWPNR TEPGGTRGLD 
DYFTRDFSHN IGAEIMGRNK FSPHRGPWRD HEWQGWWGDE PPFHTPVFVM THHERPSFTL
SDTTFHFITA DPVTVATRAK EAAAGKDVRL GGGAATIRQF LDADLVDTLH VAVSPDVEIG
SGSRLWKSPD ELDDRFHHEV VPSPSGVTHH LFWRR