| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1258 |
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| Symbol | |
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| ID | 4648599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 1347927 |
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| End bp | 1351880 |
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| Gene Length | 3954 bp |
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| Protein Length | 1317 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639804759 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_952099 |
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| Protein GI | 120402270 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.10767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.486258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTAGACG TCAACTTCTT CGATGAACTC CGCATCGGTC TCGCGACCGC GGACGACATC
CGCAACTGGT CCTTCGGCGA GGTCAAGAAG CCGGAGACCA TCAACTACCG CACGCTCAAG
CCCGAGAAGG ACGGCCTGTT CTGCGAGAAG ATCTTCGGAC CGACTCGCGA CTGGGAGTGC
TACTGCGGCA AGTACAAGCG CGTCCGGTTC AAGGGCATCA TCTGTGAGCG CTGCGGCGTC
GAGGTGACCC GCGCCAAGGT GCGCCGTGAG CGGATGGGCC ACATCGAACT GGCCGCGCCC
GTCACGCACA TCTGGTACTT CAAGGGCGTG CCCTCGCGTC TGGGCTACCT GCTCGACCTG
GCCCCGAAGG ATCTCGAGAA GATCATCTAC TTCGCGGCCT ACGTGATCAC CGCGGTCGAC
GACGAGATGC GCCACAACGA GCTGTCGACG CTGGAGGCCG AGATGGCCGT CGAGCGCAAG
GCGATCGAGG ATCAGCGCGA CGCCGACCTG GAGGCCCGCG CCCAGAAGCT CGAGGCCGAC
ATGAAGGAGC TCGAGGACGA GGGCGCCAAG TCCGACGTCA AGCGCAAGGT GCGCGACGGC
GGCGAGCGCG AGATGCGCCA GCTGCGCGAC CGGGCCCAGC GTGAGCTGGA CCGGCTCGAG
GAGATCTGGA CGACGTTCAC CAAGCTGGCT CCCAAGCAGC TGATCGTCGA CGAGCTGCTC
TACCGCGAGC TGCAGGACCG CTACGGCGAG TACTTCGAGG GCGCCATGGG TGCCGAGTCG
ATCAAGAAGC TCATCGAGAA CTTCGACATC GACGCCGAGG CCGAGTCGCT GCGCGACACC
ATCAAGAACG GCAAGGGCCA GAAGAAGCTG CGTGCGCTCA AGCGACTCAA GGTCGTCGCC
GCGTTCCAGA CCAATCGGAA CTCGCCGATG GGCATGGTGC TCGACGCCGT TCCGGTGATC
CCGCCGGAGC TGCGCCCCAT GGTTCAGCTC GACGGTGGCC GCTTCGCGAC GTCGGACCTC
AACGACCTGT ACCGCCGCGT CATCAACCGC AACAACCGGC TCAAGCGACT GATCGACCTC
GGTGCTCCCG AGATCATCGT CAACAACGAG AAGCGCATGC TTCAGGAGTC GGTGGACGCG
CTGTTCGACA ACGGCCGTCG CGGCCGGCCG GTCACCGGGC CGGGCAACCG TCCGCTGAAG
TCGCTGTCCG ATCTGCTCAA GGGCAAGCAG GGCCGGTTCC GTCAGAACCT GCTCGGCAAG
CGCGTCGACT ACTCGGGCCG TTCGGTCATC GTGGTCGGCC CGCAGCTCAA GCTGCACCAG
TGCGGTCTGC CCAAGCTGAT GGCTCTCGAG CTGTTCAAGC CGTTCGTGAT GAAGCGTCTG
GTCGACCTGA ACCATGCGCA GAACATCAAG AGCGCCAAGC GCATGGTGGA ACGTCAGCGT
CCCCAGGTGT GGGATGTCCT CGAAGAGGTC ATCGCCGAGC ACCCGGTGCT GCTGAACCGT
GCACCCACGC TGCACCGCCT CGGTATCCAG GCCTTCGAGC CGCAGCTGGT GGAGGGCAAG
GCCATCCAGC TGCACCCGCT GGTCTGTGAG GCGTTCAACG CCGACTTCGA CGGCGACCAG
ATGGCCGTGC ACCTTCCGCT GTCCGCGGAG GCGCAGGCCG AGGCCCGCAT CCTGATGCTG
TCCTCGAACA ACATCCTGTC GCCCGCGTCG GGCCGCCCGC TGGCCATGCC GCGTCTGGAC
ATGGTGACCG GCTTGTACTT CCTGACCACC GAGATCGAGG GTGACACGGG CGAGTTCACC
CCGGCCGCCA AGGATCAGCC GGAGTCCGGC GTGTACAGCT CGCCGGCCGA GGCCATCATG
GCGTTGGACC GCGGCGCGCT GAGCGTGCGG GCCAAGATCC GGGTGCGGCT GACCCAGCTG
CGTCCGCCCG CCGAGATCGA GGCCGAGCGG TTCCCGGACG GCTGGAACAT GGGCGACGCC
TGGACGGCGG AGACCACCTT GGGCCGCGTG CTCTTCAATG AGCTGCTGCC GCGGGGCTAC
CCGTTCGTCA ACAAGCAGAT GCACAAGAAG GTGCAGGCCG CGATCATCAA CGATCTGGCC
GAGCGCTACC CGATGATCGT CGTCGCGCAG ACCGTCGACA AGCTCAAGGA CGCCGGCTTC
TACTGGGCCA CCCGTTCGGG TGTCACCGTG TCGATGGCCG ACGTGCTGGT GCCGCCGGAG
AAGCAGGAGA TCCTCGAGCG CTACGAGGCG GAAGCCGACA GCATCGAGAA GCAGTACCAG
CGCGGCAAGC TCAACAAGGA CGAGCGCAAC GAAGCGTTGG TGAAGATCTG GCAGGACGCG
ACCGAAGAGG TCGGTCAGGC GCTGCGGTCG CACTACCCGA AGGACAACCC GATCATCACG
ATCGTGGATT CGGGCGCGAC GGGTAACTTC ACCCAGACGC GGACGCTGGC CGGCATGAAG
GGTCTGGTGA CCAACCCGAA GGGTGAGTTC ATCCCGCGTC CGATCAAGTC CTCGTTCCGC
GAGGGCCTGA CGGTGCTGGA GTACTTCATC AACACCCACG GCGCCCGCAA GGGTCTGGCG
GACACCGCTC TGCGTACCGC CGACTCGGGC TACCTGACCC GTCGTCTGGT CGACGTGTCG
CAGGACGTCA TCGTGCGCGA GACCGACTGT GAGACCGAGC GCGGCATCAC CGTCACGCTG
GCCGAGAAGC AGGCCGACGG CACCCTGGTG CGCGATCAGC ACATCGAGAC CTCCGCCTAC
GCGCGGACGC TGGCCACCGA CGCGGTCGAC GCCAAGGGCA ATGTGATCGT CGAGCGCGGT
CACGACCTCG GCGACCCGGC CATCGACGCG CTGTTGGCCG CCGGCATCAC CGAGGTCAAG
GTCCGCTCCG TGCTGACCTG CGGCACCGGT ACCGGTGTGT GTGCGATGTG CTACGGCCGT
TCGATGGCGA CCGGCAAGCT GGTCGACATC GGCGAGGCCG TCGGCATCGT GGCCGCGCAG
TCCATCGGTG AGCCCGGCAC GCAGCTGACC ATGCGTACCT TCCACCAGGG TGGCGTCACC
GGCGGTGCCG ACATCGTCGG TGGTCTGCCC CGCGTGCAGG AGCTGTTCGA GGCCCGTATC
CCACGGAACC GTGCCCCGAT CGCCGACGTG TCCGGGCGGA TCCGCCTGGA GGAGAGCGAC
AAGTTCTACA AGATCACCAT CGTTCCCGAC GACGGGGGCG AGGAGGTCGT GTACGACAAG
CTCTCGCGTC GTCAGCGCCT GAAGGTGTTC AAGCACGACG ACGGCTCCGA GCGTTTGCTG
ACCGACGGCG ACCACGTCGA GGTCGGCCAG CAGCTGCTGG AAGGCTCGGC CGACCCGCAC
GAGGTGCTGC GCGTCCAGGG TCCCCGCGAG GTGCAGATCC ACCTCGTCAA GGAGGTCCAG
GAGGTGTACC GCGCCCAGGG TGTGTCGATC CACGACAAGC ACATCGAGGT CATCGTCCGG
CAGATGCTGC GTCGCGTCAC GATCATCGAT TCGGGTGCGA CGGAGTTCCT GCCCGGCTCG
CTGACCGAGC GTGGCGAGTT CGAGACCGAG AACCGTCGGG TCGTCGCCGA GGGCGGCGAG
CCCGCGGCGG GTCGCCCGGT GCTGATGGGT ATCACCAAGG CGTCGCTGGC CACCGATTCG
TGGCTGTCGG CGGCGTCGTT CCAGGAGACC ACCCGCGTGC TGACCGATGC GGCGATCAAC
TGCCGCAGCG ACAAGCTGCA GGGTCTGAAG GAGAACGTGA TCATCGGCAA GCTGATCCCG
GCCGGTACCG GCATCAACCG GTACCGCAAC ATCCAGGTTC AGCCGACCGA AGAGGCCCGC
GCCGCGGCGT ACACGATCCC GTCCTACGAG GATCAGTACT ACAGCCCGGA CTTCGGCCAG
GCCACCGGTG CTGCGGTGCC GCTGGACGAT TACGGCTACT CGGACTACCG GTAA
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| Protein sequence | MLDVNFFDEL RIGLATADDI RNWSFGEVKK PETINYRTLK PEKDGLFCEK IFGPTRDWEC
YCGKYKRVRF KGIICERCGV EVTRAKVRRE RMGHIELAAP VTHIWYFKGV PSRLGYLLDL
APKDLEKIIY FAAYVITAVD DEMRHNELST LEAEMAVERK AIEDQRDADL EARAQKLEAD
MKELEDEGAK SDVKRKVRDG GEREMRQLRD RAQRELDRLE EIWTTFTKLA PKQLIVDELL
YRELQDRYGE YFEGAMGAES IKKLIENFDI DAEAESLRDT IKNGKGQKKL RALKRLKVVA
AFQTNRNSPM GMVLDAVPVI PPELRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLIDL
GAPEIIVNNE KRMLQESVDA LFDNGRRGRP VTGPGNRPLK SLSDLLKGKQ GRFRQNLLGK
RVDYSGRSVI VVGPQLKLHQ CGLPKLMALE LFKPFVMKRL VDLNHAQNIK SAKRMVERQR
PQVWDVLEEV IAEHPVLLNR APTLHRLGIQ AFEPQLVEGK AIQLHPLVCE AFNADFDGDQ
MAVHLPLSAE AQAEARILML SSNNILSPAS GRPLAMPRLD MVTGLYFLTT EIEGDTGEFT
PAAKDQPESG VYSSPAEAIM ALDRGALSVR AKIRVRLTQL RPPAEIEAER FPDGWNMGDA
WTAETTLGRV LFNELLPRGY PFVNKQMHKK VQAAIINDLA ERYPMIVVAQ TVDKLKDAGF
YWATRSGVTV SMADVLVPPE KQEILERYEA EADSIEKQYQ RGKLNKDERN EALVKIWQDA
TEEVGQALRS HYPKDNPIIT IVDSGATGNF TQTRTLAGMK GLVTNPKGEF IPRPIKSSFR
EGLTVLEYFI NTHGARKGLA DTALRTADSG YLTRRLVDVS QDVIVRETDC ETERGITVTL
AEKQADGTLV RDQHIETSAY ARTLATDAVD AKGNVIVERG HDLGDPAIDA LLAAGITEVK
VRSVLTCGTG TGVCAMCYGR SMATGKLVDI GEAVGIVAAQ SIGEPGTQLT MRTFHQGGVT
GGADIVGGLP RVQELFEARI PRNRAPIADV SGRIRLEESD KFYKITIVPD DGGEEVVYDK
LSRRQRLKVF KHDDGSERLL TDGDHVEVGQ QLLEGSADPH EVLRVQGPRE VQIHLVKEVQ
EVYRAQGVSI HDKHIEVIVR QMLRRVTIID SGATEFLPGS LTERGEFETE NRRVVAEGGE
PAAGRPVLMG ITKASLATDS WLSAASFQET TRVLTDAAIN CRSDKLQGLK ENVIIGKLIP
AGTGINRYRN IQVQPTEEAR AAAYTIPSYE DQYYSPDFGQ ATGAAVPLDD YGYSDYR
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