| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1257 |
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| Symbol | rpoB |
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| ID | 4648598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 1344387 |
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| End bp | 1347872 |
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| Gene Length | 3486 bp |
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| Protein Length | 1161 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639804758 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_952098 |
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| Protein GI | 120402269 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.568598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAGGGT CCCGCCAGAT CGAGTCAACC ACTAACAACT CCGTTCCCGG AGCACCAAAC
CGAATTTCTT TTGCCAAGCT CCGTGAGCCG CTCGAGGTTC CGGGGCTTCT CGACGTTCAG
ACCGAATCGT TCGAGTGGCT GATCGGCGCG GAGGACTGGT TCCAGCGCGC CGCCGACCGC
GGCGACGTAG ACCCCAAGGG CGGTCTGCAG GAGGTACTCG AAGAGCTCTC GCCGATCGAG
GACTTCTCCG GCTCGATGTC GCTGTCGTTC TCCGATCCGC GCTTCGACGA GGTCAAGGCG
CCGGTCGACG AGTGCAAAGA CAAGGACATG ACGTACGCGG CCCCGCTGTT CGTCACGGCC
GAGTTCATCA ACAACAACAC CGGCGAGATC AAGAGCCAGA CGGTCTTCAT GGGCGACTTC
CCGATGATGA CCGAGAAGGG CACCTTCATC ATCAACGGCA CCGAGCGTGT CGTGGTGAGC
CAGCTGGTCC GTTCGCCCGG TGTGTACTTC GACGAGTCGA TCGACAAGTC GACGGAGAAG
ACGCTGCACA GCGTCAAGGT GATCCCCGGC CGCGGCGCGT GGCTGGAGTT CGACGTCGAC
AAGCGCGACA CCGTCGGTGT CCGCATCGAC CGCAAGCGTC GTCAGCCCGT CACCGTGCTG
CTCAAGGCGC TCGGCTGGAC CAACGAGCAG ATCGTGGAGC GCTTCGGCTT CTCCGAGATC
ATGATGAGCA CGCTGGAGAA GGACAACACC GCAGGCACCG ACGAGGCGCT GCTGGACATC
TACCGGAAGC TGCGTCCGGG CGAGCCCCCC ACCAAGGAGT CCGCGCAAAC CCTGCTGGAG
AACCTGTTCT TCAAGGAGAA GCGTTACGAC CTGGCCCGCG TCGGCCGCTA CAAGGTCAAC
AAGAAGCTGG GCCTCAACGT CGGCCAGCCG ATCACCAGCT CGACGCTGAC CGAAGAGGAC
GTCGTCGCCA CCATCGAGTA CCTGGTCCGC CTGCATCAGG GCGACCAGAC GATGACGGCG
CCCGGTGGCT CCGAGGTGCC CGTCGAGGTC GACGACATCG ACCACTTCGG CAACCGTCGC
CTGCGCACCG TGGGCGAGCT GATCCAGAAC CAGATCCGGG TCGGCCTGTC CCGTATGGAG
CGCGTCGTGC GTGAGCGCAT GACCACCCAG GACGTCGAGG CGATCACGCC GCAGACCCTG
ATCAACATCC GACCCGTCGT GGCGGCGATC AAGGAGTTCT TCGGCACCAG CCAGCTGTCG
CAGTTCATGG ACCAGAACAA CCCGCTGTCG GGTCTGACCC ACAAGCGCCG CCTGTCGGCG
CTGGGCCCCG GCGGTCTGTC CCGTGAGCGC GCCGGCCTCG AGGTCCGCGA CGTGCACTCC
AGCCACTACG GCCGGATGTG CCCGATCGAG ACCCCTGAGG GTCCGAACAT CGGCCTGATC
GGTTCGCTGT CGGTGTACGC GCGGGTCAAC CCGTTCGGCT TCATCGAGAC GCCGTACCGG
AAGGTGACTG ACGGAGTTGT CACCGACCAG ATCGACTACC TGACCGCCGA CGAGGAGGAC
CGCCACGTCG TGGCGCAGGC CAACTCGCCG CTCGACGGTG ACGGCCACTT CGAGGAGGAG
CGCGTCCTGG TCCGCCGTAA GGGCGGCGAG GTCGAGTTCG TGTCGGCCGC CGAGGTGGAC
TACATGGACG TGTCGCCGCG CCAGATGGTG TCGGTCGCCA CGGCCATGAT CCCGTTCCTC
GAGCACGACG ACGCCAACCG TGCCCTGATG GGTGCCAACA TGCAGCGCCA GGCGGTTCCG
CTGGTGCGCA GCGAGGCGCC GCTGGTCGGC ACCGGTATGG AGCTGCGTGC CGCGATCGAC
GCCGGCGACG TGGTCGTGAC CGAGAAGGCC GGTGTGGTCG AGGAGGTCTC CGCCGACTAC
ATCACCGTGA TGGCCGACGA CGGCACCCGG CACACCTACC GGATGCGCAA GTTCGCCCGC
TCCAACCACG GCACCTGCGC CAACCAGCGC CCGATCGTGG ACGCCGGGCA GCGTGTCGAG
TCGGGTCAGG TGCTCGCCGA CGGACCGTGC ACCGAGAACG GTGAGATGGC CCTGGGCAAG
AACCTGCTCG TGGCGATCAT GCCGTGGGAG GGTCACAACT ACGAGGACGC GATCATCCTG
TCCAACCGGC TGGTTGAAGA GGACGTGCTC ACCTCGATCC ACATCGAAGA GCACGAGATC
GATGCCCGCG ACACCAAGCT GGGCGCCGAG GAGATCACCC GGGACATCCC GAACGTCTCC
GACGAGGTGC TCGCCGATCT CGACGAGCGC GGCATCATCC GCATCGGCGC CGAGGTCCGC
GACGGCGACA TCCTGGTCGG CAAGGTCACC CCGAAGGGCG AGACCGAGCT GACCCCGGAG
GAGCGCCTGC TGCGCGCCAT CTTCGGTGAG AAGGCCCGCG AGGTCCGCGA CACGTCACTC
AAGGTGCCCC ACGGTGAGTC GGGCAAGGTC ATCGGCATCC GGGTGTTCTC CCGCGAGGAC
GATGACGAGC TGCCCGCCGG TGTCAACGAG CTGGTCCGCG TCTACGTGGC CCAGAAGCGC
AAGATCTCCG ACGGCGACAA GCTCGCCGGA CGCCACGGCA ACAAGGGCGT CATCGGCAAG
ATCCTGCCCG TCGAGGACAT GCCGTTCCTT CCGGACGGCA CCCCGGTGGA CATCATCCTG
AACACCCACG GTGTGCCGCG TCGTATGAAC ATCGGCCAGA TCCTGGAGAC CCACCTCGGG
TGGGTGGCCA AGGCGGGTTG GAACATCGAC GTCGCGGCCG GGACTCCGGA GTGGGCGGCC
AAGCTGCCCG AGCAGATGCT CTCGGCCCCG GCCGACAGCA TCGTGGCCAC CCCGGTGTTC
GACGGTGCCC AGGAAGGTGA GCTGCAGGGT CTGCTCGGCT CGACGTTGCC CAACCGCGAC
GGCGAGACGA TGGTCAACGC CGACGGCAAG GCGACGCTGT TCGACGGCCG CAGTGGCGAA
CCGTTCCCGT ACCCGGTGAC GGTCGGCTAC ATGTACATCC TGAAGCTGCA CCACCTGGTG
GACGACAAGA TCCACGCCCG CTCCACCGGT CCGTACTCGA TGATCACGCA GCAGCCGCTG
GGTGGTAAGG CGCAGTTCGG TGGTCAGCGG TTCGGTGAGA TGGAGTGCTG GGCCATGCAG
GCCTACGGCG CGGCGTACAC GCTGCAGGAG CTCCTGACGA TCAAGTCCGA TGACACCGTC
GGCCGCGTCA AGGTCTACGA GGCGATCGTC AAGGGCGAGA ACATCCCGGA GCCGGGCATC
CCGGAGTCGT TCAAGGTGCT TCTCAAGGAG CTGCAGTCGC TGTGCCTCAA CGTCGAGGTC
CTGTCCTCGG ACGGTGCTGC GATCGAGATG CGTGACGGTG ACGACGAGGA CCTGGAGCGT
GCCGCTGCCA ACCTCGGAAT CAACCTGTCC CGCAACGAAT CCGCATCTGT TGAGGATCTT
GCGTAG
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| Protein sequence | MAGSRQIEST TNNSVPGAPN RISFAKLREP LEVPGLLDVQ TESFEWLIGA EDWFQRAADR
GDVDPKGGLQ EVLEELSPIE DFSGSMSLSF SDPRFDEVKA PVDECKDKDM TYAAPLFVTA
EFINNNTGEI KSQTVFMGDF PMMTEKGTFI INGTERVVVS QLVRSPGVYF DESIDKSTEK
TLHSVKVIPG RGAWLEFDVD KRDTVGVRID RKRRQPVTVL LKALGWTNEQ IVERFGFSEI
MMSTLEKDNT AGTDEALLDI YRKLRPGEPP TKESAQTLLE NLFFKEKRYD LARVGRYKVN
KKLGLNVGQP ITSSTLTEED VVATIEYLVR LHQGDQTMTA PGGSEVPVEV DDIDHFGNRR
LRTVGELIQN QIRVGLSRME RVVRERMTTQ DVEAITPQTL INIRPVVAAI KEFFGTSQLS
QFMDQNNPLS GLTHKRRLSA LGPGGLSRER AGLEVRDVHS SHYGRMCPIE TPEGPNIGLI
GSLSVYARVN PFGFIETPYR KVTDGVVTDQ IDYLTADEED RHVVAQANSP LDGDGHFEEE
RVLVRRKGGE VEFVSAAEVD YMDVSPRQMV SVATAMIPFL EHDDANRALM GANMQRQAVP
LVRSEAPLVG TGMELRAAID AGDVVVTEKA GVVEEVSADY ITVMADDGTR HTYRMRKFAR
SNHGTCANQR PIVDAGQRVE SGQVLADGPC TENGEMALGK NLLVAIMPWE GHNYEDAIIL
SNRLVEEDVL TSIHIEEHEI DARDTKLGAE EITRDIPNVS DEVLADLDER GIIRIGAEVR
DGDILVGKVT PKGETELTPE ERLLRAIFGE KAREVRDTSL KVPHGESGKV IGIRVFSRED
DDELPAGVNE LVRVYVAQKR KISDGDKLAG RHGNKGVIGK ILPVEDMPFL PDGTPVDIIL
NTHGVPRRMN IGQILETHLG WVAKAGWNID VAAGTPEWAA KLPEQMLSAP ADSIVATPVF
DGAQEGELQG LLGSTLPNRD GETMVNADGK ATLFDGRSGE PFPYPVTVGY MYILKLHHLV
DDKIHARSTG PYSMITQQPL GGKAQFGGQR FGEMECWAMQ AYGAAYTLQE LLTIKSDDTV
GRVKVYEAIV KGENIPEPGI PESFKVLLKE LQSLCLNVEV LSSDGAAIEM RDGDDEDLER
AAANLGINLS RNESASVEDL A
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