Gene Mvan_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1228 
Symbol 
ID4644275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1315564 
End bp1316352 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content68% 
IMG OID639804726 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_952069 
Protein GI120402240 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0512718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.43815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGCCGT TCGACCGGCA GAAAGACCCC TGCGCGCGGA TTCGGCGGCC GCCACTGCAT 
ACGCTGACGG GCATGGCCGA TTCGGACCGT CTCTACTTCA GACAGCTTCT CTCGGGCCGT
GATTACGCGG CCGGCGACAT GATCGCCCAG CAGATGCGCA ACTTCGCCTA CCTGATCGGT
GACCGGGAGA CCGGCGACAC CGTTGTGGTG GACCCCGCCT ACGCGGCCCA GGACCTGGTG
GACGCGCTGG AAGCCGACGG CATGCAGCTG TCCGGTGTGC TCGTCACCCA TCATCACCCC
GACCACATCG GCGGCTCGAT GATGGGCTTC GAGCTCAAGG GGCTGGCCGA GCTGTTGGAG
CGGGTGAGTG TCCCGATCCA CGTCAACGCT CATGAAGCGG ATTGGGTTTC GCGGACCACC
GGGATCGCGC GCAGCGAGCT GACGGCGCAT CAGCACGGCG ACAAGGTCTC GGTCGGTGAC
ATCGACATCG AGCTGCTGCA CACCCCGGGG CACACGCCGG GCAGTCAGTG TTTCCTGCTC
GACGGCCGGC TGGTCGCCGG GGACACCCTG TTCCTGGAGG GATGTGGGCG CACCGACTTC
CCCGGCGGCA ACGTCGACGA CATGTTCCGC AGCCTGCAGG CGCTCGCAGC GCTGCCCGGC
GACCCCACGG TGTTCCCGGG TCACTGGTAC TCCGCCGACC CCAGCGCGCC GCTGTCCGAC
GTCCGGCAGA CGAACTATGT CTACCGCGCG AGCGATCTGG ACCAGTGGCG CATGCTGATG
GGCGGCTGA
 
Protein sequence
MRPFDRQKDP CARIRRPPLH TLTGMADSDR LYFRQLLSGR DYAAGDMIAQ QMRNFAYLIG 
DRETGDTVVV DPAYAAQDLV DALEADGMQL SGVLVTHHHP DHIGGSMMGF ELKGLAELLE
RVSVPIHVNA HEADWVSRTT GIARSELTAH QHGDKVSVGD IDIELLHTPG HTPGSQCFLL
DGRLVAGDTL FLEGCGRTDF PGGNVDDMFR SLQALAALPG DPTVFPGHWY SADPSAPLSD
VRQTNYVYRA SDLDQWRMLM GG