| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1214 |
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| Symbol | |
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| ID | 4644261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 1300244 |
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| End bp | 1303036 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639804712 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_952055 |
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| Protein GI | 120402226 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.428987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACC AGGGTCGGGG TGTGCGCCTG CGCGGGCGTC GCGAGGAGTG CGCGACCCTG
CGGGCCCTTG TCGGCGCCGC CGATCCCGAC TCCGGCCGGG TCCTCGTCAT CCGTGGCGAG
GCCGGGGTCG GCAAGACCGC GCTGCTGGAC TATGTGCACC GCCAGGCGAC CGACTTCCAG
TGCGCCCGGG TGGCCGGCGT CGAATCCGAC ATGGAACTCG CGTTCGCCGG ACTGCACCAG
TTGTGCGCCC CGCTGCTCAC GCACCTCGAC GAACTGCCTT CACCGCAGCG CGACGCGCTC
AGTGTGGCGT TCGGTCGTGG CGTCGGCCCC GCCCCGGACC GGTTCCTCGT CGGCCTCGCC
GTGCTCAGCC TGATGTCCGC CGCGGCGCGC TCCACCCCGC TGCTGTGTGT GGTCGACGAC
GCCCAATGGC TCGACCAGGT GTCGGTGCAG ACGCTCGGAT TCGTCGCGCG CCGCCTGCTG
GCCGAGCCGG TGGTGATGGT CTTCGCCGTC CGTGACAACG CCGACGTCCT CTCCGGACTC
CCCGAGATGT TCGTCACCGG CCTCCCCGAC GGTGACGCGC GCAAACTGCT GGAGTCGGTC
GTGCTCGGCC GGATCGACGA TCGAGTCAGG GACCGTATCC TGGCCGAGAC CCGGGGCAAT
CCGCTTGCGC TGCTGCAGGT GCCGCGCAAT GTGTCCGCCG CCGAGCTCGC GGGCGGCTTC
GGCTACACGA TTGCACGCCC CTCTGCGGGT CACATCGAAG AAGGTTTCGT CCGCCGGATC
CGATCACTGC CCGTGAAGAC CCGGCGCCTG CTGCTGGTCG CCGCGGCCGA ACCGGTCGGC
GACCCGTCAC TGTTCCTGCG GGCCGCGGAG AAACTGGGGA TCGCCGTCGA CGAGCTCGCC
CCCGCCGAGG CCGCCGAGGT GATCGAATTC GGTTCCCGGA TGCGGTTTCA CCATCCGCTG
GCCCGTTCGG CCACCTATCG AACGGCAGAT CTGACCGAGC GCAGGGAAGT TCACCGGGTG
CTGGCCGACG CCACCGATCC AGAACTCGAT CCCGACCGCC GGGCCTGGCA CGCCGCGATC
GCCGCCACCG GTCCCGACGA CGCGGTGGCC GACGACCTGG AGGCCTCGGC CTGGCGGGCC
GAGCGGCGCG GCGGCATCGC CGCCGCCGCA ACGTTTCTGG AACACGCCGC GATCCTGACC
TCAGAGCCCG TCAAGCGGGG CTCCAGGGCG ATCGCTGCAG CGCAGGCCAA ACGCGATGCG
GCCGCCCCGG ACTCGGCGTC AGAGCTTCTC GCGATCGCCG ACCTGCAACC GCTCTCGGAT
CTTCAGCGCG CCCAGGTCGC CCGGCTGCGC GCCCAGATGG AGTTCAGCCG AAGCCGGGGT
GACGAGCCCG GTGCGAGTCA GATAAGCCAG GCTGCTGCCC AATTACGCTC TGCGGCAGAG
CGGCTGGAGA CCCTCGACGG CGAGCTGTCC CGGGAGACCT ACCTTGAGGC GCTCGCCGCG
GCGATGTACG CCTCGGCACG GTGCGGCGAC CCCGGGCTGC TGATGTCCAC CGCGGAAGGA
GCCCGCCGCG CGGTGAGCCG ACTCGACACC CTGGACCATC CCGCCGATCA CCTGCTCAGC
GGTCTGGCCA CCCTGCTCGT CGGCGGACGG CGTGAAGGCG CCGACCATCT CCGGACCGCG
CTGCGGATGT GGTGTGCGCG TGCAGGCGAA CGGGACGGAC AGGACCTGCG GTGGCTGTCA
CTGGCCTTCC CGATCGTCCA CGAATGTTGC GCCGCCGAAC TCTACGACGA CGGACTGACC
CATGAACTGG CCGATGTGAT GGTGCGTTAC GCGCGCGACG TCGGCGCGCT CGCGGTCCTT
CCCGCAGCGC TGTCCTACCG GGCCGGCATC CACGTCATCG CCGGTGAGTT CAACACGGCG
GCAACGCTTC TGGACGAGTC GGATGCGATC TCCGCGGCGA TCAACTACCG GCCCGTCAAA
TACCACCGGC TGCACCTGGC TGCCTGGCGC GGGGTCCCCG CCGACGCCCT GGCGCTGATC
GAGCCCGCGA CCAAGGAAGC CACGGCAAAA GGCGAAGGCA GGCTTCTGGG TCTGGCCGGT
TACGCGTCGG CGCTGCTGTA CAACGGTCTG GGCCGGTACC AGGAGGCCTT CCAAGCCGCC
CGCAGAACCT GCGAAGAAGT CGACCTGGGC TTCCACGGCT GGTGTCTGGT CGAGTTGATC
GAGTCCGCGG CGCGGATCGA CGAGCTCGAC GAGGCCGCGT CCGCGCTGCA CCGACTGGAG
GAACGCGCGG CAGACACCGG GACCGAGTGG GGCCTCGGCG CCCTCGCAGG CGCCAAAGCC
CTACTCGCCG ACGACGAGTA CGCGGACGCG CTCTTCACCG AGGCGATCGC CCGGCTCGAC
CAGACCCGCG TCGCCGTCCA CGCGGCACGC ACCCGGTTGT GCTACGGAGA GTGGCTGCGC
CGCAGGAACA GGCGCCCCGA CGCACGCACC CAGCTCGGTG ATGCTCACGA GATGTTCACC
CGGTTCGGCG CGCAGGCCTA CGCGGAGCGG GCGCGCCGCG AGTTGACCGC CGCCGGAGAG
AAGGTGCGGA CACAGCCGGA CGGCACCGGC GGTGAACTGA CGGCGCAGGA GACCCAGATC
GCGCGGCTCG CCGCGGAGGG TTTCACCAAT CAGGAGATCG GCGCCCAGCT GTTCATCAGC
GCCCACACCG CGGAGTGGCA CCTGCGGAAG GTGTTCGTCA AGCTGGGCAT CACCTCACGC
CGCCAGCTGC GCTCGATCTC CTGGGCGAGC TGA
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| Protein sequence | MANQGRGVRL RGRREECATL RALVGAADPD SGRVLVIRGE AGVGKTALLD YVHRQATDFQ
CARVAGVESD MELAFAGLHQ LCAPLLTHLD ELPSPQRDAL SVAFGRGVGP APDRFLVGLA
VLSLMSAAAR STPLLCVVDD AQWLDQVSVQ TLGFVARRLL AEPVVMVFAV RDNADVLSGL
PEMFVTGLPD GDARKLLESV VLGRIDDRVR DRILAETRGN PLALLQVPRN VSAAELAGGF
GYTIARPSAG HIEEGFVRRI RSLPVKTRRL LLVAAAEPVG DPSLFLRAAE KLGIAVDELA
PAEAAEVIEF GSRMRFHHPL ARSATYRTAD LTERREVHRV LADATDPELD PDRRAWHAAI
AATGPDDAVA DDLEASAWRA ERRGGIAAAA TFLEHAAILT SEPVKRGSRA IAAAQAKRDA
AAPDSASELL AIADLQPLSD LQRAQVARLR AQMEFSRSRG DEPGASQISQ AAAQLRSAAE
RLETLDGELS RETYLEALAA AMYASARCGD PGLLMSTAEG ARRAVSRLDT LDHPADHLLS
GLATLLVGGR REGADHLRTA LRMWCARAGE RDGQDLRWLS LAFPIVHECC AAELYDDGLT
HELADVMVRY ARDVGALAVL PAALSYRAGI HVIAGEFNTA ATLLDESDAI SAAINYRPVK
YHRLHLAAWR GVPADALALI EPATKEATAK GEGRLLGLAG YASALLYNGL GRYQEAFQAA
RRTCEEVDLG FHGWCLVELI ESAARIDELD EAASALHRLE ERAADTGTEW GLGALAGAKA
LLADDEYADA LFTEAIARLD QTRVAVHAAR TRLCYGEWLR RRNRRPDART QLGDAHEMFT
RFGAQAYAER ARRELTAAGE KVRTQPDGTG GELTAQETQI ARLAAEGFTN QEIGAQLFIS
AHTAEWHLRK VFVKLGITSR RQLRSISWAS
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