Gene Mvan_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1210 
Symbol 
ID4644257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1294722 
End bp1297976 
Gene Length3255 bp 
Protein Length1084 aa 
Translation table11 
GC content73% 
IMG OID639804708 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionYP_952051 
Protein GI120402222 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.809916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.696176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGC ACCTGCACCG GGCCGACCGC ACCGATCTGC TCGCCGACGG CCTCGGGGCG 
ATGCTGGCCG ACCCGCCCGC GGACCCGTTC GCCGAGGACC TGGTGCTGGT GTCCGCGCGC
GGCACCGAAC GCTGGCTCAG CCAGCGCCTC TCCCACATCC TCGGCCGCGG CTCCGGGCAG
GACGGCATCT GCGCGGGGGT CACGTTCCGC CACCCGCGCT CACTGATGGC GGAGCTGACC
GGAACCGACG AGGACGACCC GTGGTCGCCG GACGCGATGG TGTGGCCGCT GCTCGACGTC
ATCGACGGCT GCATCACCGA GCCGTGGTGC GCCACGCTGG CCACCCACCT CGGCCACTTC
GCCGACGGCG AGGAGAAGGT GCTGCGCCAG GGCAGGCGCT ACGCGGTGGC GCGCCGACTG
GCCGGCCTGT TCGACTCCTA CGCCCGGCAG CGCCCGCAGC TGCTGATCGA CTGGATCGAC
GGCCGCACCG GGGCGCTGGA CGAGGACCTG CGGTGGCAAC CCGAGCTGTA CCGCGCGCTG
CTGGCGCACG TCGACACCGA ACCACCACAC ATCCGGCACG CCGAAACCGT TGCGCGACTC
AGGGAATCAC CGTCGGAGCT GCCGCAGCGG CTGTCAATGT TCGGACACAC CCGGCTGCCC
GCCACCGAGA TCGAGCTGTT GGCCGCGCTG AGCACCCACC ACGACCTGCA CCTGTGGCTG
CCGCATCCCA GCGACAAGCT GTGGACCTCG CTGCGCGGCG TCCACGGGGC CGCGCCCCGC
CGCACCGACA CCTCCCACCG CGACGTCGAC CACCCGCTGC TGGCCACCCT GGGCCGCGAC
CTGCGCGAAC TGCAGCGCGT GCTGCCCGCG GACGCACAGA CCGACGAAAG CCTCGGTCCG
GCCGATCGCC CCGACACCCT GCTGGGCTGG CTGCAGTCCG ACCTGGGCGC CGACGCCGTG
CGCCCGCAGG GCCGTTCGTG CGCGCCGGGC GACCGGTCGG TGCAGGTGCA CAGCTGCCAC
GGCGCGGCCC GCCAGATCGA CGTGCTGCGG GAGGTGCTGC TCGGCCTGCT CGCCGACGAC
CCGACGCTGG AGCCCCGCGA CATCCTCGTC ATGTGCCCGG ACATCGAGAC CTACGCCCCG
TTGATCGTGG CCGGCTTCGG CCTGGGCGAC GTGGTTTCCG GCGCGCACCC CGCGCACCGG
CTGCGGGTCA CGCTGGCCGA CCGGGCACTC ACCCAGACCA ACCCGCTGCT CGGTGTCGCG
CGCCAACTGC TCGGGCTCGC CGGTGGGCGC GCCACCGCCA GCGAGGTGCT CAACCTCGCC
GAGGCCGCCC CGGTGCGGCT GCGGTTCGGG TTCACCGACG ACGACCTCGA CGCGATCGGT
GACTGGGTGC GCGAAGCCAA CATCCGCTGG GGTTTCGACC GCGGGCACCG CCACCCCTAC
GGCGTGGATT TCGTGCAGAA CACCTGGCGG TTCGGCATCG ACCGGGTGCT GGCCGGGGTC
GCGATGTCCG ACGACTCGCA CGCCTGGCTG GACACCACGT TGCCGCTCGA CGACGTGAGC
AGCAACCGGG TCGAGCTCGC GGGCCGCCTC GCCGAATACG TCGACCGACT GCGCAGTGTC
GTCGAATCCC TCTCGGGGGC AGCGGCATTG AACGATTGGC TGGCCCGACT TTCCGAGGGC
CTGGACGCGC TGACCGCGGT GTCGGACGCC GACCTGTGGC AGACCAGCCA GGTGGGCCGC
GAGCTCGCCG ACATCCTGGC CGCGGCGGGC GCGCACGCCG ACGTCGAACT GCGACTGTCC
GACATCAGGG CGCTGCTGGA CCGTCACCTG GCAGGCAGGC CCACCCGGGC CAACTTCCGC
ACCGGGACCC TGACCGTGTG CACGATGGTC CCGATGCGCT CGGTGCCGCA CCGCGTGGTG
TGCCTGGTCG GCCTCGACGA CGGGGTGTTC CCGCGCTCGG GTGTGGTCGA CGGCGACGAC
GTGCTGGCCC GCGACCCGAT GACCGGGGAA CGCGACATCC GTTCGGAGGA CCGGCAGTTG
CTGCTCGACG CGATCGGCGC GGCCACCGAG AAGCTGGTCA TCACCTACAC CGGCGCCAAC
GAGTACAGCG GGCAGCGCAA GCCGCCCGCG GTTCCGGTGA TGGAGCTGCT CGACACCCTG
GACGTCACCA CCTCCGCCCC GGTGCGCGAG ACCGTCCTCG TCGAACATCC GTTGCAGCCC
TTCGACGTCG ACAACGTCAC CCCCGGCAAG CTCGGCATGC CCGCGGGCCG GCCGTTCACG
TTCGACCCGA CCGCGCTGAC CGCGGCCACC GCCGCTGCCG GGCACCGCGG GCCGCGTCCG
CACCTGCTCG GTCGCCCGCT GCCCGCCCCG CCGCCCGCCG ACGTCGCCCT CGACGAGCTG
ATCGGCTTCT TCAAGGATCC CGTGAAGGGC TTCTTCCGGG CGCTCGATTA CACGCTGCCC
TGGGACGTCG AAGCGGTCGA GGACGCGATG CCCGTCGAGA TCGACGCGTT GCAGGAGTGG
AAGATCGGCG ACCGCATGCT CGACGACATG CTGCGCGGCA TGACCCCCGC CGACGCGCAG
CAGGCGGAGT GGCGGCGCGG TTCGCTGCCG CCCGGACGCC TCGGCTGGCG CAAAGCCCAG
GAAATCGCCT CGCGATCGGC CGCGCTGGCG GCCGCCGCGC GGCAGCACCG CACGCCGGAT
CCCAGGGCGA TCGACGTCGA CGTAGCGATC GGACCGGCGC GCCGGGTCAC CGGCACCGTG
CCACGGGTGT ACGGCAGCCG CACGGTCGCC GTCACATACT CCAAGCTCGA CGGCAGGCAT
CTGCTGGCAT CGTGGATTCG CCTGGTGGCG TTGACCGCTC ACCATCCCGG CACGGACTGG
ACGGCGGTGT GCATCGGCCG CGGGGGCCGG GGTGGGAACC AGACGAAGGA GCGGCTGCTC
GGGCCGCCGG AGGCCGCCGC CGAGGTGCTG CGCGACCTCG TCGCCATGTA CGACGCGGGC
CGCTGTGCAC CGATCCCGTT GCCGCTCAAG ACGTCCTATG CCTGGGCCGA GACGGAGTAC
CACCGCGGCA CCCCGCTGCG TGAGGCGGGC TGGAAGTGGA AGACCGGACG CTTCCCCGGC
GAGGACGCCG AACCCGCCCA CGTCAGGGTG TGGGGGCCGC ACTTCCCGCT GTCGGGTCTG
GTCTCGGCGG GGCTCCCCGA CTACTCCACG CGGCTGTGGC AGCCGATGCT GCTGGCCGAG
AGGAACCCCG CCTGA
 
Protein sequence
MALHLHRADR TDLLADGLGA MLADPPADPF AEDLVLVSAR GTERWLSQRL SHILGRGSGQ 
DGICAGVTFR HPRSLMAELT GTDEDDPWSP DAMVWPLLDV IDGCITEPWC ATLATHLGHF
ADGEEKVLRQ GRRYAVARRL AGLFDSYARQ RPQLLIDWID GRTGALDEDL RWQPELYRAL
LAHVDTEPPH IRHAETVARL RESPSELPQR LSMFGHTRLP ATEIELLAAL STHHDLHLWL
PHPSDKLWTS LRGVHGAAPR RTDTSHRDVD HPLLATLGRD LRELQRVLPA DAQTDESLGP
ADRPDTLLGW LQSDLGADAV RPQGRSCAPG DRSVQVHSCH GAARQIDVLR EVLLGLLADD
PTLEPRDILV MCPDIETYAP LIVAGFGLGD VVSGAHPAHR LRVTLADRAL TQTNPLLGVA
RQLLGLAGGR ATASEVLNLA EAAPVRLRFG FTDDDLDAIG DWVREANIRW GFDRGHRHPY
GVDFVQNTWR FGIDRVLAGV AMSDDSHAWL DTTLPLDDVS SNRVELAGRL AEYVDRLRSV
VESLSGAAAL NDWLARLSEG LDALTAVSDA DLWQTSQVGR ELADILAAAG AHADVELRLS
DIRALLDRHL AGRPTRANFR TGTLTVCTMV PMRSVPHRVV CLVGLDDGVF PRSGVVDGDD
VLARDPMTGE RDIRSEDRQL LLDAIGAATE KLVITYTGAN EYSGQRKPPA VPVMELLDTL
DVTTSAPVRE TVLVEHPLQP FDVDNVTPGK LGMPAGRPFT FDPTALTAAT AAAGHRGPRP
HLLGRPLPAP PPADVALDEL IGFFKDPVKG FFRALDYTLP WDVEAVEDAM PVEIDALQEW
KIGDRMLDDM LRGMTPADAQ QAEWRRGSLP PGRLGWRKAQ EIASRSAALA AAARQHRTPD
PRAIDVDVAI GPARRVTGTV PRVYGSRTVA VTYSKLDGRH LLASWIRLVA LTAHHPGTDW
TAVCIGRGGR GGNQTKERLL GPPEAAAEVL RDLVAMYDAG RCAPIPLPLK TSYAWAETEY
HRGTPLREAG WKWKTGRFPG EDAEPAHVRV WGPHFPLSGL VSAGLPDYST RLWQPMLLAE
RNPA