| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1193 |
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| Symbol | |
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| ID | 4646659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 1272360 |
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| End bp | 1274312 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639804691 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_952034 |
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| Protein GI | 120402205 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.142429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGGGGT TGACTGTTCT GATGTCGACG GGCGGTGCCG AGCCTCTGAC CGGCGGGTCC
TCCCGCCGGC AGCGCTGGCG TGCGCGGCTG ACCGGTGCCG ACCTGCTGCC CCCGCTGTGG
CACCTGGTGG GCTGGACCGT GGGCGTGGCG GCCGCCTCGT ACCTGGTTCG CTGGCTCGCC
TCGGTCGACG GCCGCACGTT CACGGTGGTG TGGCTGGCGG CCGCCCCGCA GCTGGTCGCG
CTGCTGCTGG CGCGGCGCAG GCACTGGCCC GCCTACCTGG TGACGTTCGC GTTCTTCCAA
TACGTGCCGG CCTGGGTGCT GCTGGACCGC CCGCCGGAAC TCGCCGCGCT GTCCACCGTC
GCCGCGGTGG TGTTCGCCGC GGCGATGCTG CATTCCGACC AGGACTGGAT CCACGGCCGC
AGCGACTCGC TGCGCAGCTG GCGCCGGTTC GTGCTGTACG GGGTCATCGT CGCGCCGGCG
TTCGCGGGCA CCGTCGGGGC GCTCAGCGTG CTGGTGCACC AGCAGGGCCG CACCGACCCG
AAGTCGCTGT GCATCGTCGC GCTGATCTGG TATCTCGCCG AGGCGGTCGG CATCGCGTTC
CTGGCGCCGG TGCTGCTGCG GTGGAACCGG TACTGGCGGC GGCACTCCGC GCGCCAGGTC
GTCACCACCG GAGGCTTCAC GGTGCTGATG GTGGCGCTGG GCCTGATCGC CGCCCACGAG
TCGAACTTCG TGCTGATGTT CCTCACCGCA GTGCCCGCGC TGCTGGTGCT GATCGAGTTC
GGTATCGCGG CGGCGTTCTG GCAGATGGCC GTCGGGGCGG CGGTGGTGCT GGGCACCACG
TTCGCCGGGC TCGGTCCGTT CGTCGCGACG GCCGTCGACC CGACCCAGGC GATGATCCAC
GCGCAGGTGT TCCTGCTCAC CGGGTACGCG ATGGTGGTGC TGGTCGCGGC GGCGCTGGAG
GAACGCAACC GACTCAGCGC GCTCGACCGC GCCAGCCACG AGGTGTACGA CCTCGTCGCC
GACCTGACCG GCGACCTGGT GATCGTCATC GATTCCCACG GCGACGTGCT GCACCACGCG
TTCACCGGGC ACAGCAACCT CAACCTGCCG AGTGGACGCA TCGGGCACGC CGACTGGGAG
AGCGAGGTGC ACCCCGACGA CCTGCACATC ATCGTCGAGC ACTGGACGTC CGGCCGCACC
GCCGCGTCGC TGCCGTTCCG GATCAGGGCC CGCGACGGGT CGTGGCGCTG GTTCGTGACA
CACACCCGCC GCGCCGCCAG GGGACTGTCG GTGGCCGTGC TACGCGACAT CACGCTGGAA
CGCGAAGTGC AGGAATCGTT GACCGACATG GCGAACACCG ACGAGCTCAC GGGGCTGCCG
AACCGTCGTG GGCTGACCCG GAGTGCCAGC GAGATCTGGT CGCGCGCATT GGAACTCGAG
CAGCCGTTGA CGGCGCTGTT CGTCGACGTC GACCACTTCA AGGCGTACAA CGACCACCAC
GGGCACCAGG CCGGTGACGT CTGCCTGCGT GACGTGGCCG ACGTGCTGGC GCATCTGGCC
GATCCACGGA CCTGCGTGGC CGCCCGGTAC GGGGGAGAGG AGTTCGCGGT CGTGCTGGCC
GGCTGCGAGG ACCCGTACAC CTTCGCGACC GGACTGTCCT CGGCGATCCG CGCCCTCGGA
ATCGGGCACC CGGTGTCACC GTGCGGCGTC GTCACCGTCA GCATCGGCGT CGCGACGGTG
TCGCCCCGCG ACGAGGCCCG CTTCGGTGGC GCCGACCCGG AGGCCGCGGT CAGCGAACTG
CTACACCGCG CGGACAAAGC CCTCTACACC GCGAAATCGC AAGGCCGCAA CGCGATCTCG
GTGGCCCACG ACGATGCGCT GCTAGTCGGC GAGCAGGTTC ACCATTCTGC TGAATACACC
CGGGAAGGTG CTCGAGGCGG GCACGATGAG TGA
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| Protein sequence | MTGLTVLMST GGAEPLTGGS SRRQRWRARL TGADLLPPLW HLVGWTVGVA AASYLVRWLA
SVDGRTFTVV WLAAAPQLVA LLLARRRHWP AYLVTFAFFQ YVPAWVLLDR PPELAALSTV
AAVVFAAAML HSDQDWIHGR SDSLRSWRRF VLYGVIVAPA FAGTVGALSV LVHQQGRTDP
KSLCIVALIW YLAEAVGIAF LAPVLLRWNR YWRRHSARQV VTTGGFTVLM VALGLIAAHE
SNFVLMFLTA VPALLVLIEF GIAAAFWQMA VGAAVVLGTT FAGLGPFVAT AVDPTQAMIH
AQVFLLTGYA MVVLVAAALE ERNRLSALDR ASHEVYDLVA DLTGDLVIVI DSHGDVLHHA
FTGHSNLNLP SGRIGHADWE SEVHPDDLHI IVEHWTSGRT AASLPFRIRA RDGSWRWFVT
HTRRAARGLS VAVLRDITLE REVQESLTDM ANTDELTGLP NRRGLTRSAS EIWSRALELE
QPLTALFVDV DHFKAYNDHH GHQAGDVCLR DVADVLAHLA DPRTCVAARY GGEEFAVVLA
GCEDPYTFAT GLSSAIRALG IGHPVSPCGV VTVSIGVATV SPRDEARFGG ADPEAAVSEL
LHRADKALYT AKSQGRNAIS VAHDDALLVG EQVHHSAEYT REGARGGHDE
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