Gene Mvan_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1162 
Symbol 
ID4646551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1236190 
End bp1237035 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content71% 
IMG OID639804660 
ProductXRE family transcriptional regulator 
Protein accessionYP_952003 
Protein GI120402174 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.157815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.774005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAGAC GCGCGCAGCA ACGCCTGGCG CTCGGTGAGT TCCTGCGGGC GCGGCGGCGG 
GCGGCGGTGC GCGCCGAACT CGGGCTGCCC GACATGCCGC GGTCGCGCAC CAGCGGGCTG
CGTCGTGAGG AGGTCGCGGT GCAGGCCGGG GTGAGCGTCA CCTGGTACAC GTGGCTGGAG
CAGGGCCGCG ACATCAACCC GTCCAGGCAG GTGCTCGACG CCATTGCGCG GGCGCTGCGG
CTGTCGCCGT CCGAACACGA TTACGTGTTA GCCCTCGGCG GCTACACCGT CGACCACGCC
GTCACCGCCG GCCCGCCGCC CCCGCAGATC CAGCGGTTCC TTGATGCGCT GGGCGGCCAT
CCGGCGTTCG CGATCACGTC GGACTGGGGA ATCGCGGCCT GGAACACCGC GTACGCGGCG
CTGTATCCGA ACATCGAGCG CGTGCCGCCC CCCGATCGGA ACCTGCTGTG GCTGGTGTTC
ATGGACCCCG CGATCCGGGA GCTGTTGCCG GACTGGGATG CCGACAGCCG GCGCTTCCTC
GCCGAGTTCC GCGCCGACGC GGGCCCGATG GTCGGCGAAC CGTCGTACAC CGCGCTGGTG
TCGCGATTGT CCTCGGAAAG CCCACATTTT GCGACGGCAT GGCGGGCCGC CGACATCGAG
CGGTTCACCT CACGCGAGCG GTTGTTCCGT CATCCCGTGG TAGGCGAGCT GCGGCTCGAA
CACCACCAGG TCGCGCCCGT CGACGTGCCC GACATCCAGA TCGTCGCCTA CCTTCCCGAG
CCGGGTTCGG TTGCAGCCGA ACGGCTTCGC CGACTCGTCG GTCAGGCCGG GGATACCGCG
CGGTAG
 
Protein sequence
MDRRAQQRLA LGEFLRARRR AAVRAELGLP DMPRSRTSGL RREEVAVQAG VSVTWYTWLE 
QGRDINPSRQ VLDAIARALR LSPSEHDYVL ALGGYTVDHA VTAGPPPPQI QRFLDALGGH
PAFAITSDWG IAAWNTAYAA LYPNIERVPP PDRNLLWLVF MDPAIRELLP DWDADSRRFL
AEFRADAGPM VGEPSYTALV SRLSSESPHF ATAWRAADIE RFTSRERLFR HPVVGELRLE
HHQVAPVDVP DIQIVAYLPE PGSVAAERLR RLVGQAGDTA R