| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1158 |
|---|
| Symbol | |
|---|
| ID | 4646722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 1231745 |
|---|
| End bp | 1232209 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639804656 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_951999 |
|---|
| Protein GI | 120402170 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.540125 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCTGCG CGAGAATGCG GCGACCGCCG ACCATCCCGA ATCCGAGGGA GCTGACCGTG
AGCCGACCGA TCCAGCGCAT CAACCCGCCC CAGCTGTTCG ACTCCACCGC GAACCATCAC
TCGCAGGGGT CCGTGGTCGA GGCGGGCAAG CTGGCCTTCT TCTCCGGCCA GGTGGCGTGG
AGCCCGTCGT GCCCGTCGGC GCCGTCCTCG CTTGCCGAGC AGGCGCGGAT GGTGACGGCC
AACCTTCAGG TGTGCCTGGA CTCCGTCGGC GCCACCCGCG ACGACATCGC GATGGCGCGG
ATCTACGTCG TCGACCTGAC GCCGGAGCGG CTGGGGGAGG CGTTTCCGGC GCTGGGGGAG
TTCTTCGGTT CCTCGCTGCC GAGCCTGACC GGGATCGGGG TGCAGGCGCT GGCCGGGCCG
GACCTGCAGA TCGAGATCGA GATGGTGGTG CGGGTGCCGT CGTGA
|
|---|
| Protein sequence | MPCARMRRPP TIPNPRELTV SRPIQRINPP QLFDSTANHH SQGSVVEAGK LAFFSGQVAW
SPSCPSAPSS LAEQARMVTA NLQVCLDSVG ATRDDIAMAR IYVVDLTPER LGEAFPALGE
FFGSSLPSLT GIGVQALAGP DLQIEIEMVV RVPS
|
|---|
| |