Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1155 |
Symbol | |
ID | 4646719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 1227929 |
End bp | 1230259 |
Gene Length | 2331 bp |
Protein Length | 776 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639804653 |
Product | secreted protein |
Protein accession | YP_951996 |
Protein GI | 120402167 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00335606 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCT CGCACCTGGC CCGAGCCATG ACCACCGCGG CGATCGCGGC ACTGCTGCTC GCCGCCTGCT CCACCGACAC CCAGGACGAG GCGCCCGCCG AGAGCACCGA CACCCCCAAG GCCACCTCGC CGATCGACTT CAACCTCCCC GACGCCGAGC GCTTCCACCG CGCCGCCACC TACCCGGTGT ACCTGAACAG GCCTGCCGGC GAAGACCCGG CCGCCGAGAC CGTCGCCGAG ATCTCCACCG TCACCCCCGA CGGCAACACG CTCATCTACA CCGACGCCGC CGCCAAGCGG ATCGGCTTCC TCGACATCCG CGACGCCGCC AAACCCGTTG GACTGGGCAC ACTTTCGCTT GAGGAGCTGG GACACGCCGA CGACCAGCCC ACCTCGGTGG CTGCGGTCGG CGAGTTCGTC CTGGTCGTCG TCGACACCAC CGGCGGGGAC TTCACCAAGC CGTCCGGGCG CGTCGACGTG GTCCGCGTGG CCGACCGGAC CCGCGTGCAC AGCATCGACC TCGGCGGCCA GCCCGACTCG ATCGCGATCG CCGGGGACGG CTCGTTCGCC GCCATCGCGA TGGAGAACCA GCGCGACGAG GAGTTCACCC CGCCCGGCGC CGAGGAAGGC GACCTGCCCC AGCCACCGAC GGGTTTCCTT CAGTTGATCA GCCTCACCGG CGCCCCGACC GGATGGACGC CGCGCAAGGT CGAGTTCGAC GTCGAGGCCG CCCGCGCGGC CGGCCTGGAC ACCCCCGAAG ACCTCGAGCC CGAGTACGTC AGCATCAACT CCCGCGGCCA GGTCGCGGTG ACGATGCAGG AGAACAACGG CATCGCCATC GTCGACGGCC GCACCGGCGC CGTGCAGAAG ATCTTCAGCG CCGGAACCGC ATCCGTGTCC GGCATCGACA CCGCCGAGGA CGACACGGTC GACCAGACCG GCTCGATCAC CGACACCCCG CGCGAACCCG ACTCCATCGG CTGGGTCGAC GACGACCACG TCGCCACCGC CAACGAGGGC GACTGGAAGG GCGGCACCCG CGGCTGGACC ATCTTCGACG CCACCACCGG CGAGGTGGTC TGGGACGCCG GCAACACCGT CGAGCAGCTG GCCGTGCGCA CCGGCATGCA CATCGAAGGT CGCTCGGAAT CCAAGGGACC CGAGCCCGAA GGCCTGGCGA TCACCGAGAT CGGCGGCCGC CCCACCGCGC TGGTGGCGTC CGAGCGGAGC AACTTCGTCG CCGTCTACGA CGTCAGCGAC GTCACCGCCC CGCAGTTCCG CCAGATCCTG CCCACCACGC CCGGCCCCGA GGGCGTGCTG CCGATCCCGT CGCGCGAGCT GGTCGTCATC TCCTCGGAGG CAGACGACGC CGAGGCCCGG GTCCGCGCAT CGGTCACCGT CTACGGGTTC GGTGCCGAAT TCGCCGGTGC CAAACCGTCT TTCCCGTCCA TCGTGTCCGG TGACGTCGAC GACGCCCCGA TCGCGTGGGG CGCACTCAGT GCGCTGTCGG CCGACCCCGC CGACGAGAAC CGGCTCTACA CCTCCACCGA CAACGCCTAC GGGCCGTCGC GGATCCTCGG TATCGACCTG ACGAAGACGC CGGCGCTGAT CGACACGCAG CTGCCGATCA CCGACAACGG CCAGCCCGTC ACCCTCGACG TGGAAGGGGT GGCCGCCAAA CCTGACGGCG GCTTCGTGCT GGCGGTCGAG GGCGAGGAGG GCCCCGGCAA CGAGCTGGTG TTCGTCGCCG CCGACGGCAA GATCGAGAAG CGGGTGTCGC TGCCCGCCGA TGTCGCGGCC GGCCTGGGTG GTCAGGGCCT GGAAGGCGTC GCGGTCGACG GTGACGCCGT CTGGGTGGCG TTGCAGCGCG AGGTCAAGAC CGACCCCAAG GGCGTGGCCA GGATCGGCCG TTACACCCCG GCCGACGACC GCTGGGAGTG GTTCGGCTAC CAGCTCGACT CCACCGACAC CGAGGGCGAC TGGATCGGGT TGTCCGAGAT CCAGGTGCAC GACGGCTCGC TGCTGGTGCT GGAGCGCGAC AAGCTCAACG GTCCCGACGC CCGGGTCAAG GCGATCTACC GCGTGGCCAT CCCGGACGGC GGGGGAGCGA CGGGTGCCGA GGCGCCGAAG GTGCTGCCGA AGACGTTGGC GCGCAACATT CTTCCCGATC TGCAGGCCAA CCGCGGCTTC ACCCAGGAGA AGGTGGAGGG CTTCGCGGTG GCAGGCAACG GCAAGCTCTA TGTCGTCACC GACAACGACG GGCTCGACGA CGCCAACGGC GAGACGGTGT TCCTCGACCT GGGGTCCGCG GGCCAGGCGC TCGGCGGGTA G
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Protein sequence | MTASHLARAM TTAAIAALLL AACSTDTQDE APAESTDTPK ATSPIDFNLP DAERFHRAAT YPVYLNRPAG EDPAAETVAE ISTVTPDGNT LIYTDAAAKR IGFLDIRDAA KPVGLGTLSL EELGHADDQP TSVAAVGEFV LVVVDTTGGD FTKPSGRVDV VRVADRTRVH SIDLGGQPDS IAIAGDGSFA AIAMENQRDE EFTPPGAEEG DLPQPPTGFL QLISLTGAPT GWTPRKVEFD VEAARAAGLD TPEDLEPEYV SINSRGQVAV TMQENNGIAI VDGRTGAVQK IFSAGTASVS GIDTAEDDTV DQTGSITDTP REPDSIGWVD DDHVATANEG DWKGGTRGWT IFDATTGEVV WDAGNTVEQL AVRTGMHIEG RSESKGPEPE GLAITEIGGR PTALVASERS NFVAVYDVSD VTAPQFRQIL PTTPGPEGVL PIPSRELVVI SSEADDAEAR VRASVTVYGF GAEFAGAKPS FPSIVSGDVD DAPIAWGALS ALSADPADEN RLYTSTDNAY GPSRILGIDL TKTPALIDTQ LPITDNGQPV TLDVEGVAAK PDGGFVLAVE GEEGPGNELV FVAADGKIEK RVSLPADVAA GLGGQGLEGV AVDGDAVWVA LQREVKTDPK GVARIGRYTP ADDRWEWFGY QLDSTDTEGD WIGLSEIQVH DGSLLVLERD KLNGPDARVK AIYRVAIPDG GGATGAEAPK VLPKTLARNI LPDLQANRGF TQEKVEGFAV AGNGKLYVVT DNDGLDDANG ETVFLDLGSA GQALGG
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