Gene Mvan_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1080 
Symbol 
ID4648465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1140686 
End bp1142431 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content66% 
IMG OID639804581 
Productpeptide synthase 
Protein accessionYP_951924 
Protein GI120402095 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCCT TCCCCGACGA CATCTTCAAC CTCGCCGACA TCGTGTTGCG GGTAGCGCGC 
GAGGATCCTG AACGCATCGC GGTCATCGAC CTGGACGGCT GGGAGGGCTA CGGCACGCGC
CGCTACAAGC CTCACACCTA CGCCGAGCTC TCGGCCGACG TCGAGTCGGT CGCGGTGGGG
CTGCGCGAGA TGGGCATTGC CGAATTGACC CGCATCGTCT GCATGTCACC GCCCAGCTAC
GAGACCTGCG TCATGGGCGT GGCCCTCACG CGGGTGGGCG CCTTCACCAT CTGGATCGAC
CCCTCGGTCG GCTATCGCAA TATCGCGGAG CGGCTCAGCC GCGTGCACCC GGAGGCGTTC
CTGGGCAACG CGCTTGCGCA CGTCGGGCGG ATCACATTCG GTTGGGGTCC GCGCGATCTC
CGGAAGCTTG TTCTCACGGA AACCCCACTG TCGCCGGGGG GCCGGTTCAT CACCGGGTTT
CCGCCCTTCC CCGGGGCGCG ATCGATCAGG TCGCTGCGAA AGCACGCACC CGCCGAGCCC
GAGCCGCCGA GAGTCGGGCC CGACGATCCC TGCGCCGTTC TCTACACCAC CGGCAGCACC
GGACCGGCGA AACCGTCGCT GTACTTGCAT CGCAACTTCT GTCAGGTATT TCGCAACGCG
CACCACAGCT GGGGCTGGGA TCGAGACACC GAGGTCCCGG TGGATCTGGC GGTTTTCCCC
GCATTTCTGT TCATCCCCAT CAGCGCCGGC GGCACGATGG TGGTGCCGCC CATCGACTTC
GCCCGACAAA GCCCGGCCAA GGTGAATTCG GCCGCCCTGA TCCAGGTCAT CAACGACTGC
AAGGTCGGGT CGTTTTTCGC CGCGCCGATC CTGATCGAGA ACCTGGCCCG AGAAGCGCTT
GCGCGAAACC TGACGATGCC CTCTCTGAAA CGCGTCATCG GGGCCGGGGC GCCGGTCACC
GGTCCAGTCG AGGAAATGCT GACCGCGGTC ATGGCTCCCG ACGGGGAGTT GGCGGCGAAC
TACGGCGCCA CCGAGGCCAT GCCGTCGACC GAGATCGGCA GTCGCGAGCA CCTTGACGGC
TTGTGGGACA TGACCGAGCA GGGTGCCGGC ATCTGTGTGG GTTACGCCCT GCCGGGCGTC
GAATTGAAGA TCATCGACAT CGTGGACGGT CCCATCGACT CCATCGAGGA AACGTCGGAG
CTGCCCGAGG GGAAAGTCGG CGAAATCCTG GTGCGGGGCA AGCACGTCAG CCCCGAGTAC
TACCTGGACC CCGAGAGCAC GCGCAAGAAC AAGGTGCCCG ACCCCCAAGG GACCTGGCAG
CGTTTTGGAG ATGTCGGTTA CCGCGACGCG CAGGCCAGGC TCTGGGTCTG CGGTCGAGTA
TCGCAGCGGG TGAAGGCAGC CGGCGGAACC GTGTTCCCGC TGCAAGTCGA GCCACTCTTC
GACGTTCACC CGAAGGTGAG GCGAAGTGCA CTGGTGGGAG TACCCACACC GGCGGGCGAG
CTGCCCGTCC TCTGCGTCGA GGTCGAGCCC GACGTCGGCA AGAACGAGCT CGCCGGTTTG
CACCAGGAAC TGCTGGCGCG GGCGGCAGCT TCCGAAATGG CGAACACGAT CCATACCATC
TTGTTCAAGC GCAGGTTGCC GGTGGATCCG CGCCACAACT CCAAGATCGA GCGCCAACAC
CTTGCCAAGT GGGCCGCCAA GCAATTATCG GGACCCGCTT CGCAGGCGCA TCGTGGGTGG
GCTTAA
 
Protein sequence
MEPFPDDIFN LADIVLRVAR EDPERIAVID LDGWEGYGTR RYKPHTYAEL SADVESVAVG 
LREMGIAELT RIVCMSPPSY ETCVMGVALT RVGAFTIWID PSVGYRNIAE RLSRVHPEAF
LGNALAHVGR ITFGWGPRDL RKLVLTETPL SPGGRFITGF PPFPGARSIR SLRKHAPAEP
EPPRVGPDDP CAVLYTTGST GPAKPSLYLH RNFCQVFRNA HHSWGWDRDT EVPVDLAVFP
AFLFIPISAG GTMVVPPIDF ARQSPAKVNS AALIQVINDC KVGSFFAAPI LIENLAREAL
ARNLTMPSLK RVIGAGAPVT GPVEEMLTAV MAPDGELAAN YGATEAMPST EIGSREHLDG
LWDMTEQGAG ICVGYALPGV ELKIIDIVDG PIDSIEETSE LPEGKVGEIL VRGKHVSPEY
YLDPESTRKN KVPDPQGTWQ RFGDVGYRDA QARLWVCGRV SQRVKAAGGT VFPLQVEPLF
DVHPKVRRSA LVGVPTPAGE LPVLCVEVEP DVGKNELAGL HQELLARAAA SEMANTIHTI
LFKRRLPVDP RHNSKIERQH LAKWAAKQLS GPASQAHRGW A