| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1060 |
|---|
| Symbol | |
|---|
| ID | 4648445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 1114556 |
|---|
| End bp | 1115239 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639804561 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_951904 |
|---|
| Protein GI | 120402075 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCTG GGGATCCGGA GGCGGCGGGC CTGCGCAAGG ATGCCGAGCG CAACCGGCGG
CGGATCATCG AGGCCGCCCG CGAACTCTGC GCCACCCGCG GGCTGGAGGC CACGCTGAAC
GAGGTGGCGC ACCACGCCAA CCTCGGTGTG GGCACCGTCT ACCGGCGGTT TCCCACCAAG
GACGCGCTGT TCGAGGCGAT CTTCCGGGAC GGGATCGATC AGCTCGTCGT GCTCGCCGAG
ACCGCGCTCG ACGCCGAGGA TTCCTGGGAG GGGTTCGCCT GGTTCGTCTG GCAGTTGTGC
GAGATGACGG CGACCGACCG CGGCCTGCGC GAGGTGGTGT TCAGCAGGGC GTACTGCGGG
GGCCGGGTGG ACGCCGCCCG CACCGAGCTG CATCCGCGTA TCTCCAAGCT CGTCGAGCGC
GCCCAGCGGG ACGGCTATCT GCGTCCCGAG GTGTCGGCGA CCGACATGCC GCTGCTGGGT
CTGATGGCGG GCACGGTGAG CGAGTACTCC GGCGAGGTGT CGGCGGATCT GTGGCGGCGC
TACGTGGCGA TCCTGTTGCA GGGCATGCGG TCTCAGCAGG GCCTGGAACA GCTTCCGGCA
GGCGCGCTGA GTCAGCCGGA GCTGGAGTCG GCGATGCACC ACTGGGTGCC GGCGGGCGCC
GGGGATTCCG CGCAGTCGCG CTAG
|
|---|
| Protein sequence | MSAGDPEAAG LRKDAERNRR RIIEAARELC ATRGLEATLN EVAHHANLGV GTVYRRFPTK
DALFEAIFRD GIDQLVVLAE TALDAEDSWE GFAWFVWQLC EMTATDRGLR EVVFSRAYCG
GRVDAARTEL HPRISKLVER AQRDGYLRPE VSATDMPLLG LMAGTVSEYS GEVSADLWRR
YVAILLQGMR SQQGLEQLPA GALSQPELES AMHHWVPAGA GDSAQSR
|
|---|
| |