Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1029 |
Symbol | |
ID | 4644250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 1080142 |
End bp | 1081401 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639804530 |
Product | mandelate racemase/muconate lactonizing protein |
Protein accession | YP_951873 |
Protein GI | 120402044 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.250337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.268513 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCGCCGA TCCGCGTCAC CGGTGCGCGT ATCACCCCCG TCGCGTTCGC CGACCCTCCG CTGCTCAACA CCGTCGGGGT GCATCAGCCC TACGCGTTGC GCGCGATCAT CCAGCTGGAC ACCGACGCCG GTCTGGTGGG CCTGGGCGAG ACCTACGCCG ACACGCGGCA CCTGGCGCGT CTACGGGCCG CCGCGGAGGC CATCACCGGC CTGGATGTGT TCGCACTGAA CAGGATCCGC GCATCCATCG GTTCCCGACT CGAAGGCGAC ACCACCGCGG TCGGCACCGC GGGAATGATC ACCTCGGCGA GCGTCGTCGA CCAGGTGCTG TCCCCGTTCG AGGTTGCCTG CCTGGACGTG CAGGGGCAGT CGCTGGGGCG GCCGGTGTCG GATCTGCTGG GCGGCGCGGT CCGTGATGCG GTCCCGTTCA GCGCCTATCT GTTCTACAAG TGGGCGGGAC ACCCGAACGC CGAACCCGAC CGGTTCGGCG AGGCCATGGA CCCGAACGGG CTGGTCGCGC AGGCCCGCCG GATCATCGAT GAATACGGCT TCACCGCAAT CAAACTCAAG GGTGGGGTGT TCCCGCCCGA AGAGGAGATG GCGGCCATCG AGGCGCTCTC GCGTAACTTC CCCGGTCTCC CGCTGCGGCT CGACCCGAAC GCGGCGTGGA CGCCGCACAC CGCCGTGAAG GTCGCCTCCG GCCTGGCCGG GATCCTCGAA TACCTGGAGG ATCCGACGCC GGGGCTGGCC GGGATGGCCG AGGTGGCACA GCAGGCGCCG ATGCCGCTGG CGACCAACAT GTGCGTCGTC GCATTCGATC AGCTGGCGCC CGCTGTCACG AAGAACGCAG TGCGCGTGGT GCTTTCGGAT CACCACTACT GGGGCGGGTT GCAGCGCTCG CGGTTGCTGG CGGGCATCTG CGACACGTTC GGGCTGGGGC TGTCGATGCA CTCCAATTCG CATCTGGGTA TCAGCCTGGC CGCGATGGTG CACCTGGCCG GTGCCACACC GAACCTCACC TACGCGTGTG ACACGCACTG GCCGTGGAAG ACGGAGGACG TCGTCAAGGA CGGGGCGCTG GCCTTCGTCG ACGGGGCCGT GCCGGTGCCC ACCTCCCCCG GCCTGGGTGT CGAGATCGAC GACGACGCAC TCGACGCGCT GCACGAGCAG TACGTGCGCT GCGGCATCCG CGACCGCGAC GACACCGGCT ACATGCGCAC CGTAGATCCG TCGTTCGAGC CGGCCGGCCC CCGCTGGTGA
|
Protein sequence | MAPIRVTGAR ITPVAFADPP LLNTVGVHQP YALRAIIQLD TDAGLVGLGE TYADTRHLAR LRAAAEAITG LDVFALNRIR ASIGSRLEGD TTAVGTAGMI TSASVVDQVL SPFEVACLDV QGQSLGRPVS DLLGGAVRDA VPFSAYLFYK WAGHPNAEPD RFGEAMDPNG LVAQARRIID EYGFTAIKLK GGVFPPEEEM AAIEALSRNF PGLPLRLDPN AAWTPHTAVK VASGLAGILE YLEDPTPGLA GMAEVAQQAP MPLATNMCVV AFDQLAPAVT KNAVRVVLSD HHYWGGLQRS RLLAGICDTF GLGLSMHSNS HLGISLAAMV HLAGATPNLT YACDTHWPWK TEDVVKDGAL AFVDGAVPVP TSPGLGVEID DDALDALHEQ YVRCGIRDRD DTGYMRTVDP SFEPAGPRW
|
| |