| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1025 |
|---|
| Symbol | |
|---|
| ID | 4644246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 1075847 |
|---|
| End bp | 1076821 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639804526 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_951869 |
|---|
| Protein GI | 120402040 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.129266 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCACCG AAGAGAACCG TTCCGTCTTG CAGGTGGGCC CGCTGATGCC GTCCCTGTCG
CGCAGGCTCG CCGACGATTA CGCGGCCCGG CGGCTGCCGA CCGAACCCAC CGAACGGGCC
GCGTTCCTCG CCGAACGCGG CGCGGAGATC ATCGCGGTCG TGACGTCGGG GCGCACCGGC
GTGGACGCCG CGCTGATGGA CGCGTTGCCC AATCTGGCGG CGGTGATCAA CTTCGGCGTG
GGCTACGACA CCACCGACGT CGCCGCCGCG GCTGCCCGCG GCATCGGGGT GAGCAACACA
CCCGACGTGC TCACTGACTG CGTCGCGGAC ACCGCGGTGG GTCTGATGAT CGACACGTTG
CGGCAGTTCT CGGCCTCGGA CCGCTATGTG CGGGCAGGCC GCTGGCCGGT CGACGGCATG
TATCCGTTGA CCCGCCAGGT CAGCAAAACG AACGTCGGCA TCATCGGCCT GGGCCGTATC
GGCGCCGCAA TCGCATTGCG GCTCAAAGCA TTCGGATGCA CGATCAGTTA CCACAACCGG
CACGAGGTGC CGGATTCGCC GTACACGTAT GCGGCGTCCC CGGTGGAGCT GGCGGCCTCG
GTGGACGTGC TCGTCGTGGC CGCGGCGGGT GGTGACGGCA CCCGCGGATT GGTGAGCAGC
GAGGTGCTCG ACGCGCTCGG CCCGCACGGC TATCTGATCA ACATCGCCCG CGGCAGTGTC
GTCGACCAGG ACGCGTTGGT CTCGGCGCTG GTGGAGCGTC GGCTCGCCGG CGCCGGTCTG
GACGTCTTCG CCGACGAGCC GCAGGTGCCC GAGGAGTTGT TCGCGCTCGA CACCGTCGTG
CTGCTGCCGC ACGTGGCCAG CGGCACGGTG CAGACCCGCG CGGCCATGGA AGCGCTGACG
CTACGCAATC TCGACGAGTT CCTGGCGACG GGCGAACTGG TGACGCCGGT GCCGTTGCCT
GCGGCGGCGA ACTAG
|
|---|
| Protein sequence | MGTEENRSVL QVGPLMPSLS RRLADDYAAR RLPTEPTERA AFLAERGAEI IAVVTSGRTG
VDAALMDALP NLAAVINFGV GYDTTDVAAA AARGIGVSNT PDVLTDCVAD TAVGLMIDTL
RQFSASDRYV RAGRWPVDGM YPLTRQVSKT NVGIIGLGRI GAAIALRLKA FGCTISYHNR
HEVPDSPYTY AASPVELAAS VDVLVVAAAG GDGTRGLVSS EVLDALGPHG YLINIARGSV
VDQDALVSAL VERRLAGAGL DVFADEPQVP EELFALDTVV LLPHVASGTV QTRAAMEALT
LRNLDEFLAT GELVTPVPLP AAAN
|
|---|
| |